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Series GSE80688 Query DataSets for GSE80688
Status Public on Apr 21, 2017
Title Safety and Efficacy of the JAK Inhibitor Tofacitinib Citrate for Alopecia Areata and Variants
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The samples include RNA from scalp biopsies before treatment and at 8 weeks of treatment with Tofacitinib Citrate 5 mg BID in patients with Alopecia Areata. 32% had a SALT score of 50% or higher and 47% had clinically significant response.
 
Overall design Open label trial of patients with Alopecia Areata of more than 6 months in duration refractory to standard therapy. Each patient took tofacitinib citrate 5mg BID for 3 months and then stopped. Biopsies were taken pretreatment and then at 8 weeks from the scalp and submitted for RNA sequencing.
 
Contributor(s) Oro A, Shankar G
Citation(s) 27699252
Submission date Apr 26, 2016
Last update date Sep 16, 2019
Contact name Anthony Oro
E-mail(s) oro@stanford.edu
Organization name Stanford University
Department Dermatology
Lab Oro
Street address 269 Campus Drive, CCSR 2145c
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (56)
GSM2133490 pre28
GSM2133491 pre10
GSM2133492 pre6
Relations
BioProject PRJNA319674
SRA SRP073940

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE80688_normalized_counts.txt.gz 5.8 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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