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Series GSE84249 Query DataSets for GSE84249
Status Public on Aug 11, 2016
Title Adrenalectomy plus corticosterone treatment, rat hippocampal RNA-seq
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Male Sprague-Dawley rats 8 weeks old, were adrenalectomized, treated with 300ug/kg corticosterone or vehicle 3 days after surgery then sacrificed 1 hour later. Hippocampi were removed and RNA extracted and processed for sequencing at the Massachusetts General Hospital Nex-Generation Sequening Core.
 
Overall design Includes 6 cort treated and 6 control biological replicates
 
Contributor(s) Hunter RG
Citation(s) 27457949
Submission date Jul 11, 2016
Last update date May 15, 2019
Contact name Richard G. Hunter
E-mail(s) richard.hunter@umb.edu
Phone 6172873198
Organization name University of Massachusetts Bo
Department Psychology
Lab Hunter Laboratory
Street address 100 William Morrissey Blvd.
City Boston
State/province Massachusetts
ZIP/Postal code 02125
Country USA
 
Platforms (1)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (12)
GSM2230282 Adrenalectomy 300 ug/kg corticosterone_1
GSM2230283 Adrenalectomy plus vehicle control_1
GSM2230284 Adrenalectomy plus vehicle control_2
Relations
BioProject PRJNA328468
SRA SRP078248

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84249_cuffdiff_gene_differential_expression_testing.tab.gz 1.8 Mb (ftp)(http) TAB
GSE84249_significant_transcripts.bed.gz 1.7 Kb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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