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Series GSE86209 Query DataSets for GSE86209
Status Public on May 22, 2017
Title Hhex regulates HSC self-renewal and stress hematopoiesis via repression of Cdkn2a
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The Hematopoietically-expressed homeobox transcription factor (Hhex) is important for the maturation of definitive hematopoietic progenitors and B-cells during development. We have recently shown that in adult hematopoiesis, Hhex is dispensable for maintenance of hematopoietic stem cells (HSCs) and myeloid lineages but essential for the commitment of Common Lymphoid Progenitors (CLPs) to lymphoid lineages. However, whether Hhex plays a role in HSC self-renewal and myeloid expansion during hematopoietic stress is unknown. Here we show that during serial bone marrow transplantation, Hhex-deleted HSCs are progressively lost, revealing an intrinsic defect in HSC self-renewal. Moreover, Hhex-deleted mice show markedly impaired hematopoietic recovery following myeloablation. In vitro, Hhex-null blast colonies were incapable of replating, implying a specific requirement for Hhex in immature hematopoietic progenitors. Transcriptome analysis of Hhex-null Lin-Sca+Kit+ (LSK) cells showed that Hhex deletion leads to the deregulation of Polycomb Repressive Complex 2 (PRC2) target genes, including an upregulation of Cdkn2a locus, encoding the cell cycle repressors p16Ink4a and p19Arf. Indeed, loss of Cdkn2a restored Hhex-null blast colony replating in vitro, as well as hematopoietic reconstitution following myeloablation in vivo. Thus, HSCs require Hhex to repress Cdkn2a to enable continued self-renewal and response to hematopoietic stress.
 
Overall design Transcriptional profiling of Hhex-deleted and wild-type LSK cells using RNA sequencing
 
Contributor(s) Jackson JT, Shields BJ, Shi W, McCormack MP
Citation(s) 28577303
Submission date Aug 29, 2016
Last update date May 15, 2019
Contact name Wei Shi
E-mail(s) Wei.Shi@onjcri.org.au
Organization name Olivia Newton-John Cancer Research Institute
Street address 145 Studley Road
City Heidelberg
State/province Victoria
ZIP/Postal code 3084
Country Australia
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (4)
GSM2298146 Hhex-deleted LSK cells rep 1
GSM2298147 Hhex-deleted LSK cells rep 2
GSM2298148 Wild-type LSK cells rep 1
Relations
BioProject PRJNA340892
SRA SRP083323

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86209_RAW.tar 650.0 Kb (http)(custom) TAR (of TXT)
GSE86209_Supp_Raw_Counts.txt.gz 254.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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