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Series GSE87714 Query DataSets for GSE87714
Status Public on Jan 10, 2017
Title EZH2 inhibition in multiple myeloma downregulates myeloma associated oncogenes and upregulates microRNAs with potential tumor suppressor functions [mRNA expression]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Multiple Myeloma (MM) is a plasma cell tumor localized to the bone marrow (BM). Despite current progress in improving patient outcome, MM remains largely incurable. Disease clonal and interpatient heterogeneity has hampered identification of a common underlying mechanism for disease establishment and have slowed the development of novel targeted therapies. Epigenetic aberrations are now emerging as increasingly important in tumorigenesis, thus selective targeting of crucial epigenetic enzymes may provide new therapeutic potential in cancer including MM. Recently, we and others suggested the histone methyltransferase enhancer of zeste homolog 2 (EZH2), to be a potential therapeutic target in MM. Now we show that pharmacological inhibition of EZH2 suppresses the MM cell growth through downregulation of MM-associated oncogenes; IRF-4, XBP-1, PRDM1/BLIMP-1and c-MYC. We also show that downregulation of these genes is mediated via reactivated expression of microRNAs with tumor suppressor functions; primarily miR125a-3p and miR320c. Using chromatin immunoprecipitation (ChIP) we demonstrate that miR125a-3p and miR320c are targets of EZH2 and H3K27me3 in MM cell lines and primary MM cells. Our results further highlight the importance of polycomb-mediated silencing in MM to include microRNAs with tumor suppressor activity. This novel role further strengthens the oncogenic features of EZH2 and its potential as a therapeutic target in MM.
 
Overall design 6 samples (3 biological replicates) were used in this analysis. The pairwise comparision of Inactive drug (UNC2400) wth the active drug (UNC1999) was made for each biological replicate.The anti-myeloma effects exerted by EZH2 inhibition was investigated using UNC1999, small specific inhibitor of EZH2, at 120 hours post-treament by analyzing global changes in mRNA and miRNA expression
 
Contributor(s) Alzrigat M, Agarwal P
Citation(s) 28052011
Submission date Oct 06, 2016
Last update date Jan 11, 2017
Contact name Prasoon Agarwal
E-mail(s) helena.jernberg_wiklund@igp.uu.se
Organization name Rudbeck Laboratory, Uppsala University
Department IGP
Street address Dag Hammarshkojlds vag 20
City Uppsala
State/province Sweden
ZIP/Postal code 75185
Country Sweden
 
Platforms (1)
GPL17585 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [probe set (exon) version]
Samples (6)
GSM2339213 INA-6 treated with control UNC2400, biological repl 1
GSM2339214 INA-6 treated with EZH2 inhibitor UNC1999, biological repl 1
GSM2339215 INA-6 treated with control UNC2400, biological repl 2
This SubSeries is part of SuperSeries:
GSE87716 EZH2 inhibition in multiple myeloma downregulates myeloma associated oncogenes and upregulates microRNAs with potential tumor suppressor functions
Relations
BioProject PRJNA345623

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE87714_RAW.tar 137.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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