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Series GSE94126 Query DataSets for GSE94126
Status Public on Jun 13, 2017
Title Next Generation Sequencing of Gene expression changes in U2OS osteosarcoma cells with PML silencing
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We used next generation sequencing to analyze the gene expression changes in U2OS osteosarcoma cells expressing shRNA targeting the promyelocytic leukemia (PML) gene transcripts
 
Overall design cDNA libraries of U2OS cells expressing control shRNA or shRNA targeting PML were generated from one biological replicate
 
Contributor(s) Salsman J, Kurkuba KR, Smith KS, Montgomery SB, Dellaire G
Citation(s) 28332630
Submission date Jan 26, 2017
Last update date May 15, 2019
Contact name Stephen B Montgomery
E-mail(s) smontgom@stanford.edu
Organization name Stanford University
Department Pathology
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5324
Country USA
 
Platforms (1)
GPL15456 Illumina HiScanSQ (Homo sapiens)
Samples (2)
GSM2470224 shControl
GSM2470225 shPML
Relations
BioProject PRJNA369001
SRA SRP097979

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94126_RAW.tar 16.3 Mb (http)(custom) TAR (of FPKM_TRACKING)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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