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Series GSE94692 Query DataSets for GSE94692
Status Public on Aug 01, 2017
Title Effects of the vertically transmitted microsporidian Facilispora margolisi and the parasiticide emamectin benzoate on salmon lice (Lepeophtheirus salmonis)
Platform organism Lepeophtheirus salmonis
Sample organism Lepeophtheirus salmonis oncorhynchi
Experiment type Expression profiling by array
Summary This study investigates transcriptomic responses of Pacific salmon lice, Lepeophtheirus salmonis, to infection with the microsporidian Facilispora margolisi and/or exposure to emamectin benzoate (EMB), an antiparasitic agent commonly used in salmon aquaculture.
 
Overall design Copepodid larvae derived from individual egg strings were divided into control (0 ppb EMB) and treated (1 ppb EMB) groups, n = 14 pools for each group. Half of each group (i.e. control and treated) was derived from egg strings that tested positive for F. margolisi infection (n = 7 pools/group) and the other half of each group were derived from F. margolisi negative eggs.
 
Contributor(s) Poley JD, Sutherland BJ, Koop BF, Fast MD, Jones SR
Citation(s) 28818044
Submission date Feb 08, 2017
Last update date Oct 11, 2019
Contact name Ben F Koop
E-mail(s) bkoop@uvic.ca
Phone (250) 472-4067
Organization name The University of Victoria
Department Biology
Lab Centre for Biomedical Research
Street address PO Box 3020 STN CSC
City Victoria
State/province BC
ZIP/Postal code V8W 3N5
Country Canada
 
Platforms (1)
GPL15566 GiLS Lepeophtheirus salmonis
Samples (28)
GSM2480969 MS-/EMB-_rep1
GSM2480970 MS+/EMB-_rep1
GSM2480971 MS-/EMB+_rep1
Relations
BioProject PRJNA371827

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94692_RAW.tar 251.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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