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Sample GSM1056334 Query DataSets for GSM1056334
Status Public on Dec 18, 2013
Title CHC591N
Sample type genomic
 
Source name CHC591N
Organism Homo sapiens
Characteristics age: 37
Sex: F
pathological diagnosis: normal liver
Extracted molecule genomic DNA
Extraction protocol DNA was extracted from 3 mm3 frozen tumor samples using high salt precipitation (as described in PMID: 3344216).
Label Cy5 and Cy3
Label protocol standard Illumina protocol
 
Hybridization protocol standard Illumina protocol
Scan protocol standard Illumina protocol
Description normal liver
Data processing standard Illumina protocol. Beta values exported from Illumina Beadstudio software.
 
Submission date Dec 20, 2012
Last update date Dec 18, 2013
Contact name Eric Letouzé
E-mail(s) Eric.letouze@inserm.fr
Organization name Ligue Contre Le Cancer
Lab Centre de Recherche des Cordeliers
Street address 15 rue de l'école de médecine
City Paris
ZIP/Postal code 75006
Country France
 
Platform ID GPL13534
Series (2)
GSE43091 Genome-scale methylome profiling of hepatocellular adenomas.
GSE43273 Genome-scale methylome and SNP profiling of hepatocellular adenomas and carcinomas

Data table header descriptions
ID_REF
VALUE Beta values
DETECTION_P-VALUE

Data table
ID_REF VALUE DETECTION_P-VALUE
cg00000029 0.3306988 0
cg00000108 0.5527218 0
cg00000109 0.8588825 0
cg00000165 0.141161 0
cg00000236 0.7948207 0
cg00000289 0.5901394 0
cg00000292 0.7292745 0
cg00000321 0.2621486 0
cg00000363 0.6647717 0
cg00000622 0.007694897 0
cg00000658 0.8258464 0
cg00000714 0.2200602 0
cg00000721 0.9215888 0
cg00000734 0.06660631 0
cg00000769 0.0740933 0
cg00000807 0.6707017 0
cg00000884 0.8667958 0
cg00000905 0.0743274 0
cg00000924 0.5450686 0
cg00000948 0.8985424 0

Total number of rows: 485577

Table truncated, full table size 10984 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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