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Sample GSM1094492 Query DataSets for GSM1094492
Status Public on Mar 09, 2013
Title WT vehicle (7991003028_A)
Sample type RNA
 
Source name HSC
Organism Mus musculus
Characteristics background mouse strain: C57B16
genotype: WT
treatment: Vehicle
Treatment protocol Interferon 10,000 units per day for 4 weeks or vehicle control
Growth protocol In vivo isolation
Extracted molecule total RNA
Extraction protocol Invitrogen PicoPure extraction kit
Label Biotin
Label protocol Illumina® TotalPrep™ RNA Amplification Kit according to protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description WT vehicle
Data processing Gene Pattern (Broad Institute) software, Illumina module, Quantile normalization
 
Submission date Mar 07, 2013
Last update date Mar 11, 2013
Contact name Steven Lane
Organization name QIMR
Street address 300 Herston Rd
City Brisbane
ZIP/Postal code 4064
Country Australia
 
Platform ID GPL6885
Series (1)
GSE44961 Depletion of Jak2V617F MPN-propagating stem cells by interferon-alpha in a murine model of polycythemia vera

Data table header descriptions
ID_REF
VALUE average intensities
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 4116.682 0
ILMN_2721178 1107.116 0
ILMN_3033922 906.9011 0
ILMN_3092673 3855.691 0
ILMN_2816356 110.4235 0.283208
ILMN_2808939 1426.586 0
ILMN_2634564 594.8698 0
ILMN_2737647 100.9686 0.5776942
ILMN_2734484 1058.296 0
ILMN_2952292 337.424 0.001253133
ILMN_2699078 116.6378 0.1942356
ILMN_1213681 573.2244 0
ILMN_2735413 105.9697 0.3784461
ILMN_2735415 110.8679 0.2781955
ILMN_2891688 987.8668 0
ILMN_2637698 820.7513 0
ILMN_2674228 1350.094 0
ILMN_2601546 145.7199 0.05388471
ILMN_1230831 92.85564 0.8546366
ILMN_2848071 97.79111 0.6842105

Total number of rows: 25697

Table truncated, full table size 756 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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