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Sample GSM1104152 Query DataSets for GSM1104152
Status Public on Apr 23, 2013
Title Rat Carotid artery - Injury
Sample type RNA
 
Source name Rat Carotid artery - Balloon Injury Model
Organism Rattus norvegicus
Characteristics gender: male
weight: 250g
tissue: Carotid artery
strain: Sprague-Dawley
stress: balloon injury
Treatment protocol Balloon injury was induced in the carotid arteries.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using Trizol reagent following manufacturer's protocol. Quality was monitored using Agilent 2100 Bioanalyzer.
Label Cy3
Label protocol Agilent's miRNA Labeling Reagent was used for Cyanine-3 labeling
 
Hybridization protocol Agilent's miRNA Hybridization Kit was used for hybridization.
Scan protocol Agilent's DNA microarray scanner and Feature Extraction Software was used for scaning and data acquisition.
Description Gene expression in rat carotid artery 10days after balloon injury
Data processing The data was normalized and clustered using Agilent's GeneSpring Software.
 
Submission date Mar 22, 2013
Last update date Apr 23, 2013
Contact name Nakwon Choe
E-mail(s) nakwonchoe69@hanmail.net
Organization name Chonnam Univ. Med. Sch.
Street address Baekseo-ro 160
City Gwangju
ZIP/Postal code 501-746
Country South Korea
 
Platform ID GPL10344
Series (1)
GSE45433 miRNA expression profile in rat carotid artery balloon injury model

Data table header descriptions
ID_REF
VALUE Normalized signal intensity
Raw

Data table
ID_REF VALUE Raw
rno-miR-434 0.9584778 30.3825
rno-miR-27a 1.1971406 2331.97
rno-miR-186 1.2128601 45.4335
rno-miR-30c-2* 1.0377802 12.7538
rno-miR-333_v11.0 1.3986273 11.6042
rno-let-7b 1.0353643 3552.48
rno-miR-674-5p 8.646198 5.02556
rno-miR-301b 1 1
rno-let-7e* 0.0923215 0.142934
rno-miR-345-5p 1.0218321 80.8728
rno-miR-148b-3p 1.022731 41.902
rno-miR-34c 13.728611 8.69967
rno-miR-463 1 1
rno-miR-497 0.8460797 605.475
rno-miR-125b-5p 0.92360437 4763.36
rno-miR-7a 1.0114591 21.2018
rno-miR-151 1.1609821 166.587
rno-miR-23a* 1.4868989 21.2802
rno-miR-448 1 1
rno-miR-409-5p 1 1

Total number of rows: 350

Table truncated, full table size 9 Kbytes.




Supplementary file Size Download File type/resource
GSM1104152_G4_251915910117_2_3.txt.gz 2.4 Kb (ftp)(http) TXT
Processed data included within Sample table

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