|
| Status |
Public on Aug 01, 2013 |
| Title |
UC13-0-6h |
| Sample type |
RNA |
| |
|
| Source name |
UM-UC13, control 6h
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: UM-UC13
cell type: bladder cancer
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
control 6h
|
| Data processing |
BeadStudio normalization = rank invariant
|
| |
|
| Submission date |
Apr 17, 2013 |
| Last update date |
Aug 01, 2013 |
| Contact name |
wei Qi |
| E-mail(s) |
david_weiqi@hotmail.com
|
| Organization name |
UT MD Anderson Cancer Center
|
| Street address |
7777 Knight Rd.
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77054 |
| Country |
USA |
| |
|
| Platform ID |
GPL6947 |
| Series (1) |
| GSE46132 |
Genome-wide analysis of gene expression in bladder cancer cell lines 253JB-V and UM-UC13 exposed to bortezomib |
|
