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Sample GSM1138876 Query DataSets for GSM1138876
Status Public on May 11, 2013
Title HUVEC MEF2 A/C SI.2
Sample type RNA
 
Source name HUVEC
Organism Homo sapiens
Characteristics cell line: HUVEC
genotype/variation: MEF2A/C
Treatment protocol Transfected with siRNAs (Stealth siRNA, Invitrogen) for 72 hours
Growth protocol HUVECs grown in EGM-2 (Lonza)
Extracted molecule total RNA
Extraction protocol Qiagen miRNeasy per manufacturer's protocol
Label CY3
Label protocol Samples were labeled according to gene expression profiling protocol from Illumina
 
Hybridization protocol Samples were hybridized onto beadchips according to gene expression profiling protocol from Illumina.
Scan protocol The Illumina BeadArray Reader and BeadScan software were used to scan and extract raw intensity values.
Data processing Background subtraction and quantile normalization were performed.
 
Submission date May 10, 2013
Last update date May 11, 2013
Contact name hyung chun
E-mail(s) hyung.chun@yale.edu
Organization name Yale University
Department Internal Medicine
Street address 300 George St Room 770H
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL10558
Series (1)
GSE46825 Apelin/APJ signaling mediated by G alpha 13 and MEF2 in endothelial cells

Data table header descriptions
ID_REF
VALUE Software computed quantile-normalized and background subtracted
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 120.414 0.07922078
ILMN_2055271 131.0555 0.01038961
ILMN_1736007 103.2336 0.7038961
ILMN_2383229 109.7182 0.412987
ILMN_1806310 114.4516 0.2272727
ILMN_1779670 107.1143 0.5363637
ILMN_1653355 127.9919 0.01818182
ILMN_1717783 102.1168 0.7519481
ILMN_1705025 105.7382 0.6025974
ILMN_1814316 106.8168 0.5519481
ILMN_2359168 102.8138 0.7233766
ILMN_1731507 96.48938 0.938961
ILMN_1787689 107.0419 0.5428572
ILMN_3241953 223.8114 0
ILMN_1745607 110.3608 0.3805195
ILMN_2136495 106.9153 0.5467532
ILMN_1668111 110.4291 0.3779221
ILMN_2295559 107.1587 0.5298702
ILMN_1735045 140.3509 0.001298701
ILMN_1680754 102.3377 0.7454545

Total number of rows: 47321

Table truncated, full table size 1375 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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