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Sample GSM1265757 Query DataSets for GSM1265757
Status Public on Nov 01, 2021
Title wild type, replicate 4
Sample type RNA
 
Source name bone marrow, wild-type
Organism Mus musculus
Characteristics background: B6D2F1
tissue: Bone marrow
condition: wild type
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with TRIzol (Life Technologies)
Label biotin
Label protocol cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA
 
Hybridization protocol Hybridization was performed according to standard Affymetrix protocol
Scan protocol GeneChips were scanned using the GeneChip 3000 7G Plus Affymetrix scanner
Description Gene expression data from bone marrow cells, wild type
Data processing The data were normalized and background corrected using the RMA function in R/Bioconductor
 
Submission date Nov 15, 2013
Last update date Nov 01, 2021
Contact name Paolo Uva
Organization name IRCCS Istituto Giannina Gaslini
Lab Clinical Bioinformatics
Street address Via Gerolamo Gaslini, 5
City Genoa
ZIP/Postal code 16147
Country Italy
 
Platform ID GPL8321
Series (1)
GSE52414 Gene expression changes induced in mouse bone marrow by placenta growth factor (PlGF) overexpression.

Data table header descriptions
ID_REF
VALUE Log2 RMA normalized signal

Data table
ID_REF VALUE
1415670_at 5.789373488
1415671_at 8.313286824
1415672_at 8.933336821
1415673_at 5.359249642
1415674_a_at 7.030601215
1415675_at 6.480064105
1415676_a_at 8.224715746
1415677_at 6.421964887
1415678_at 6.856801844
1415679_at 9.127140091
1415680_at 6.416860179
1415681_at 7.232258319
1415682_at 7.406092413
1415683_at 8.035459498
1415684_at 5.882947157
1415685_at 5.661331055
1415686_at 6.050190678
1415687_a_at 9.635331976
1415688_at 7.066263395
1415689_s_at 6.059918458

Total number of rows: 22690

Table truncated, full table size 521 Kbytes.




Supplementary file Size Download File type/resource
GSM1265757_wt12.CEL.gz 1.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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