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Status
Public on Jan 08, 2007
Title
AtGen_6-9121_Heatstress-Roots-0.5h_Rep1
Sample type
RNA
Source name
Col-0
Organism
Arabidopsis thaliana
Characteristics
Stock Code: N1092 Tissue: Roots
Treatment protocol
At day 16, stress treatment started at 3 hours of light treatment. Heat stress (38°C, samples taken at 0.25, 0.5, 1.0, 3.0h of hs and +1, +3, +9, +21h recovery at 25°C),Group Nover/von Koskull-Döring
Extracted molecule
total RNA
Label
biotin
Description
location: Growth Room Atmosphere: Normal Humidity: 50% Temperature: 24 Lighting: 16 hour days Medium: Murashige and Skoog Water: N/A
Data processing
The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
Submission date
Aug 25, 2006
Last update date
Aug 28, 2018
Contact name
Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s)
affy@arabidopsis.info
Phone
+44 (0)115 951 3237
Fax
+44 (0)115 951 3297
URL
http://arabidopsis.info/
Organization name
Nottingham Arabidopsis Stock Centre (NASC)
Department
School of Biosciences, University of Nottingham
Street address
Sutton Bonington Campus
City
Loughborough
ZIP/Postal code
LE12 5RD
Country
United Kingdom
Platform ID
GPL198
Series (1)
GSE5628
AtGenExpress: Stress Treatments (Heat stress)
Relations
Reanalyzed by
GSE119083
Data table header descriptions
ID_REF
VALUE
This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL
A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE
A p-value indicating the significance of the Detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-r2-P1-cre-5_at
1.95404772949219E+003
P
2.44141003349796E-004
AFFX-r2-P1-cre-3_at
2.20117089843750E+003
P
2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at
3.03770019531250E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at
4.52953216552734E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at
1.09748908996582E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at
1.11352210998535E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at
8.47592010498047E+001
P
2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at
4.79174690246582E+001
P
2.44141003349796E-004
AFFX-r2-Ec-bioB-3_at
4.83706245422363E+001
P
2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at
1.81653285026550E+000
A
8.28612983226776E-001
AFFX-r2-Bs-thr-5_s_at
3.84770393371582E+000
A
3.66210997104645E-001
AFFX-r2-Bs-thr-3_s_at
1.44994652271271E+000
A
6.01073980331421E-001
AFFX-r2-Bs-phe-M_at
3.31908553838730E-001
A
5.00000000000000E-001
AFFX-r2-Bs-phe-5_at
2.32659745216370E+000
A
6.01073980331421E-001
AFFX-r2-Bs-phe-3_at
2.57836318016052E+000
A
3.03710997104645E-001
AFFX-r2-Bs-lys-M_at
1.28254756331444E-001
A
6.33789002895355E-001
AFFX-r2-Bs-lys-5_at
2.18361306190491E+000
A
3.34473013877869E-001
AFFX-r2-Bs-lys-3_at
9.91619491577148E+000
P
3.02734002470970E-002
AFFX-r2-Bs-dap-M_at
1.25210535526276E+000
A
3.98925989866257E-001
AFFX-r2-Bs-dap-5_at
4.91093665361404E-001
A
6.33789002895355E-001
Total number of rows: 22810 Table truncated, full table size 1250 Kbytes .Supplementary file
Size
Download
File type/resource
GSM131445.CEL.gz
2.4 Mb
(ftp) (http)
CEL