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Sample GSM131445 Query DataSets for GSM131445
Status Public on Jan 08, 2007
Title AtGen_6-9121_Heatstress-Roots-0.5h_Rep1
Sample type RNA
 
Source name Col-0
Organism Arabidopsis thaliana
Characteristics Stock Code: N1092
Tissue: Roots
Treatment protocol At day 16, stress treatment started at 3 hours of light treatment.
Heat stress (38°C, samples taken at 0.25, 0.5, 1.0, 3.0h of hs and +1, +3, +9, +21h recovery at 25°C),Group Nover/von Koskull-Döring
Extracted molecule total RNA
Label biotin
 
Description location: Growth Room
Atmosphere: Normal
Humidity: 50%
Temperature: 24
Lighting: 16 hour days
Medium: Murashige and Skoog
Water: N/A
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Aug 25, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) affy@arabidopsis.info
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5628 AtGenExpress: Stress Treatments (Heat stress)
Relations
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 1.95404772949219E+003 P 2.44141003349796E-004
AFFX-r2-P1-cre-3_at 2.20117089843750E+003 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at 3.03770019531250E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at 4.52953216552734E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at 1.09748908996582E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at 1.11352210998535E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at 8.47592010498047E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at 4.79174690246582E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-3_at 4.83706245422363E+001 P 2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at 1.81653285026550E+000 A 8.28612983226776E-001
AFFX-r2-Bs-thr-5_s_at 3.84770393371582E+000 A 3.66210997104645E-001
AFFX-r2-Bs-thr-3_s_at 1.44994652271271E+000 A 6.01073980331421E-001
AFFX-r2-Bs-phe-M_at 3.31908553838730E-001 A 5.00000000000000E-001
AFFX-r2-Bs-phe-5_at 2.32659745216370E+000 A 6.01073980331421E-001
AFFX-r2-Bs-phe-3_at 2.57836318016052E+000 A 3.03710997104645E-001
AFFX-r2-Bs-lys-M_at 1.28254756331444E-001 A 6.33789002895355E-001
AFFX-r2-Bs-lys-5_at 2.18361306190491E+000 A 3.34473013877869E-001
AFFX-r2-Bs-lys-3_at 9.91619491577148E+000 P 3.02734002470970E-002
AFFX-r2-Bs-dap-M_at 1.25210535526276E+000 A 3.98925989866257E-001
AFFX-r2-Bs-dap-5_at 4.91093665361404E-001 A 6.33789002895355E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.




Supplementary file Size Download File type/resource
GSM131445.CEL.gz 2.4 Mb (ftp)(http) CEL

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