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Status
Public on Jan 08, 2007
Title
AtGen_6-9611_Heatstress(3h)+21hrecovery-Shoots-24.0h_Rep1
Sample type
RNA
Source name
Col-0
Organism
Arabidopsis thaliana
Characteristics
Stock Code: N1092 Tissue: Shoots
Treatment protocol
At day 16, stress treatment started at 3 hours of light treatment. Heat stress (38°C, samples taken at 0.25, 0.5, 1.0, 3.0h of hs and +1, +3, +9, +21h recovery at 25°C),Group Nover/von Koskull-Döring
Extracted molecule
total RNA
Label
biotin
Description
location: Growth Room Atmosphere: Normal Humidity: 50% Temperature: 24 Lighting: 16 hour days Medium: Murashige and Skoog Water: N/A
Data processing
The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
Submission date
Aug 25, 2006
Last update date
Aug 28, 2018
Contact name
Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s)
affy@arabidopsis.info
Phone
+44 (0)115 951 3237
Fax
+44 (0)115 951 3297
URL
http://arabidopsis.info/
Organization name
Nottingham Arabidopsis Stock Centre (NASC)
Department
School of Biosciences, University of Nottingham
Street address
Sutton Bonington Campus
City
Loughborough
ZIP/Postal code
LE12 5RD
Country
United Kingdom
Platform ID
GPL198
Series (1)
GSE5628
AtGenExpress: Stress Treatments (Heat stress)
Relations
Reanalyzed by
GSE118579
Reanalyzed by
GSE119083
Data table header descriptions
ID_REF
VALUE
This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL
A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE
A p-value indicating the significance of the Detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-r2-P1-cre-5_at
3.08395996093750E+003
P
2.44141003349796E-004
AFFX-r2-P1-cre-3_at
3.48489135742188E+003
P
2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at
4.50832000732422E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at
6.55127807617188E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at
1.79256973266602E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at
1.93326065063477E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at
9.31585159301758E+001
P
2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at
8.36358184814453E+001
P
7.32421991415322E-004
AFFX-r2-Ec-bioB-3_at
6.92326965332031E+001
P
2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at
1.20171725749969E+000
A
7.25830018520355E-001
AFFX-r2-Bs-thr-5_s_at
1.01499900817871E+001
M
4.61426004767418E-002
AFFX-r2-Bs-thr-3_s_at
1.66941869258881E+000
A
8.05419981479645E-001
AFFX-r2-Bs-phe-M_at
1.59555232524872E+000
A
5.67627012729645E-001
AFFX-r2-Bs-phe-5_at
3.35856723785400E+000
A
7.18750000000000E-001
AFFX-r2-Bs-phe-3_at
5.27793407440186E+000
A
3.34473013877869E-001
AFFX-r2-Bs-lys-M_at
2.71297764778137E+000
A
3.98925989866257E-001
AFFX-r2-Bs-lys-5_at
3.58430457115173E+000
A
4.66064006090164E-001
AFFX-r2-Bs-lys-3_at
5.45383167266846E+000
A
2.74170011281967E-001
AFFX-r2-Bs-dap-M_at
2.57461935281754E-001
A
9.53857004642487E-001
AFFX-r2-Bs-dap-5_at
7.42103934288025E-001
A
8.28612983226776E-001
Total number of rows: 22810 Table truncated, full table size 1250 Kbytes .Supplementary file
Size
Download
File type/resource
GSM131467.CEL.gz
2.2 Mb
(ftp) (http)
CEL