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Sample GSM13172 Query DataSets for GSM13172
Status Public on Dec 04, 2003
Title Colon 3B
Sample type RNA
 
Source name Whole segment, colon, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) Pascale.Anderle@isrec.unil.ch
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL82
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
LN_C3_ADI nat. log transformed MAS5 data
LN_C3_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE LN_C3_ADI LN_C3_ADI_Norm
AFFX-MurIL2_at 38.4 3.648 3.562
AFFX-MurIL10_at 31.6 3.453 3.339
AFFX-MurIL4_at 22.9 3.131 3.026
AFFX-MurFAS_at 291.1 5.674 5.608
AFFX-BioB-5_at 555.5 6.32 6.397
AFFX-BioB-M_at 1158.3 7.055 7.223
AFFX-BioB-3_at 895.3 6.797 6.937
AFFX-BioC-5_at 2240.7 7.715 7.982
AFFX-BioC-3_at 1484.3 7.303 7.526
AFFX-BioDn-5_at 1628.4 7.395 7.637
AFFX-BioDn-3_at 8672.9 9.068 9.451
AFFX-CreX-5_at 17869.8 9.791 10.119
AFFX-CreX-3_at 27384.6 10.218 10.452
AFFX-BioB-5_st 180.4 5.195 5.131
AFFX-BioB-M_st 198.7 5.292 5.216
AFFX-BioB-3_st 46.9 3.848 3.737
AFFX-BioC-5_st 41.9 3.735 3.618
AFFX-BioC-3_st 73.9 4.303 4.185
AFFX-BioDn-5_st 97.9 4.584 4.528
AFFX-BioDn-3_st 251.5 5.527 5.483

Total number of rows: 12477

Table truncated, full table size 334 Kbytes.




Supplementary data files not provided

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