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Sample GSM139584 Query DataSets for GSM139584
Status Public on Dec 19, 2008
Title HB47
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.57232159909287
117_3p_at 7.76674539610363
1494_3p_f_at 7.43290134822346
1552275_3p_s_at 7.39152470004221
1552281_3p_at 8.97975416054598
1552296_3p_at 5.96689376316503
1552302_3p_at 6.48585799558632
1552311_3p_a_at 8.17951985335752
1552321_3p_a_at 4.56460600235944
1552340_3p_at 6.6490949945008
1552343_3p_s_at 7.2610512781392
1552354_3p_at 7.34490794580852
1552476_3p_s_at 7.90944037295124
1552480_3p_s_at 3.48819409488864
1552504_3p_a_at 7.65227687410577
1552518_3p_s_at 5.53147495099046
1552528_3p_at 8.16330756015113
1552535_3p_at 7.73208946150259
1552566_3p_at 6.42249469177068
1552575_3p_a_at 8.0936315794561

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139584.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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