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Sample GSM1435717 Query DataSets for GSM1435717
Status Public on Jul 12, 2014
Title Testis_Wt(TgMsi2)_rep4
Sample type RNA
 
Source name Mouse testis
Organism Mus musculus
Characteristics strain: B6xCBA
age: 3 months
tissue: testis
genotype/variation: Wt(TgMsi2)
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from samples using a QIAGEN RNeasy Mini Kit (Hilden, Germany). The quality and quantity of mouse total RNA was ascertained on the Agilent Bioanalyser 2100.
Label Cy3
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description comparison 2
Data processing GenomeStudio was used to convert the signal on the array into a TXT file for analysis
 
Submission date Jul 11, 2014
Last update date Jul 12, 2014
Contact name Jessie M Sutherland
E-mail(s) jessie.sutherland@newcastle.edu.au
Organization name University of Newcastle
Street address University Drive
City Callaghan
ZIP/Postal code 2304
Country Australia
 
Platform ID GPL6885
Series (1)
GSE59358 Microarray analysis of differential gene expression of whole testis extracts from transgenic Musashi-2 and transgenic Musashi-1 over-expression mice

Data table header descriptions
ID_REF
VALUE log transformed and normalized intensity

Data table
ID_REF VALUE
ILMN_2896528 9.69408084
ILMN_2721178 8.206993414
ILMN_3033922 9.796935657
ILMN_3092673 11.30217425
ILMN_2816356 7.965749384
ILMN_2808939 9.138459189
ILMN_2634564 9.291441081
ILMN_2737647 7.645143639
ILMN_2734484 10.70382433
ILMN_2952292 7.625479612
ILMN_2699078 7.561323621
ILMN_1213681 10.03637319
ILMN_2735413 7.67936629
ILMN_2735415 7.654194521
ILMN_2891688 10.07488409
ILMN_2637698 9.480745348
ILMN_2674228 8.288957507
ILMN_2601546 7.699791991
ILMN_1230831 7.548204921
ILMN_2848071 7.835526525

Total number of rows: 25697

Table truncated, full table size 624 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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