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Sample GSM148823 Query DataSets for GSM148823
Status Public on Dec 07, 2007
Title adult head_AA18_experimentcnbwtemp
Sample type RNA
 
Source name adult head
Organism Drosophila melanogaster
Characteristics cn bw stock
Biomaterial provider Young Laboratory
Treatment protocol 25 C DD (after 12-hr 18 C/12-hr 25 C thermocycle in constant darkness)
Growth protocol initially 25 C DD, then 12-hr 18 C/12-hr 25 C thermocycle in constant darkness
Extracted molecule total RNA
Extraction protocol Flies were immediately frozen on dry ice. Approximately 100-200 heads were isolated on sieves after breaking the frozen flies
Label biotin
Label protocol Approximately 25 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description none
Data processing Bioconductor Robust Multi-array Average
 
Submission date Dec 06, 2006
Last update date Dec 12, 2006
Contact name Herman Wijnen
E-mail(s) hw3a11@soton.ac.uk
Phone 02380594336
Organization name University of Southampton
Department Centre for Biological Sciences
Lab Wijnen
Street address Life Sciences Building 85 - Highfield Campus
City Southampton
State/province Hampshire
ZIP/Postal code SO17 1BJ
Country United Kingdom
 
Platform ID GPL72
Series (2)
GSE6492 AA1/AA2 time course of cn bw
GSE6542 Circadian time course

Data table header descriptions
ID_REF
NVALUE RMA calculated signal intensity normalized to the experimental average (set at 0)
VALUE RMA calculated signal intensity

Data table
ID_REF NVALUE VALUE
141200_at -0.077083333 4.126
141201_at 0.028083333 6.269
141202_at -0.08875 6.659
141203_at 0.109666667 6.015
141204_at -0.075166667 5.912
141205_at 0.08775 6.48
141206_at -0.092416667 7.974
141207_at 0.094416667 4.486
141208_at -0.063666667 7.499
141209_at 0.0095 7.803
141210_at 0.224333333 4.099
141211_at 0.113833333 5.786
141212_at 0.089833333 9.194
141213_at 0.06175 7.334
141214_at 0.031083333 8.597
141215_at 0.007083333 7.965
141216_at -0.102583333 7.295
141217_at -0.017416667 9.207
141218_at 0.098166667 6.607
141219_at -0.014333333 4.696

Total number of rows: 14010

Table truncated, full table size 367 Kbytes.




Supplementary file Size Download File type/resource
GSM148823.CEL.gz 2.6 Mb (ftp)(http) CEL

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