NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM153468 Query DataSets for GSM153468
Status Public on Dec 30, 2006
Title neurological disease control sample x159
Sample type RNA
 
Source name whole blood
Organism Homo sapiens
Characteristics neurological disease control
Extracted molecule total RNA
Extraction protocol Venous blood was collected in PAXgene (PreAnalytiX) tubes and immediately incubated at room temperature for 24 hours. RNA was then extracted following the PAXgene procedure including DNase treatment.
Label biotin
Label protocol Approximately 4 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Whole blood from a patient with Alzheimer's disease
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Dec 26, 2006
Last update date Jan 11, 2007
Contact name Aron C Eklund
Organization name Technical University of Denmark
Department Center for Biological Sequence Analysis
Street address Kemitorvet, Building 208
City Lyngby
ZIP/Postal code 2800
Country Denmark
 
Platform ID GPL96
Series (1)
GSE6613 Parkinson's disease vs. controls, whole blood

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 327
AFFX-BioB-M_at 1414.9
AFFX-BioB-3_at 543
AFFX-BioC-5_at 1422.4
AFFX-BioC-3_at 1262.7
AFFX-BioDn-5_at 725.5
AFFX-BioDn-3_at 5910.7
AFFX-CreX-5_at 13582.9
AFFX-CreX-3_at 19984.6
AFFX-DapX-5_at 1.7
AFFX-DapX-M_at 38.6
AFFX-DapX-3_at 3.5
AFFX-LysX-5_at 14.5
AFFX-LysX-M_at 6.4
AFFX-LysX-3_at 17
AFFX-PheX-5_at 2.2
AFFX-PheX-M_at 1.4
AFFX-PheX-3_at 13.2
AFFX-ThrX-5_at 2.9
AFFX-ThrX-M_at 6

Total number of rows: 22283

Table truncated, full table size 345 Kbytes.




Supplementary file Size Download File type/resource
GSM153468.CEL.gz 3.1 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap