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Sample GSM158142 Query DataSets for GSM158142
Status Public on Apr 23, 2007
Title BALB-RAG_OVA Replicate 3
Sample type RNA
 
Source name mouse whole lung
Organism Mus musculus
Characteristics 8 wk old BALB/c (or BALB-RAG) mice were sensitized to ovalbumin (or PBS)]on days 1 and 7, and challenged with aerosolized ovalbumin (or PBS) on days 15-21, and samples harvested on day 22
Extracted molecule total RNA
Extraction protocol RNA was isolated using TRIZOL reagent (Gibco-BRL Life Technologies) according to the manufacturers protocol
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on rat RAE-230A microrray gene chips. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description gene expression from allergen stimulated mouse lung
Data processing GCRMA
 
Submission date Jan 24, 2007
Last update date Aug 28, 2018
Contact name Xin Lu
E-mail(s) xin.x.lu@abbott.com
Phone 847-937-7942
Organization name Abbott Laboratories
Department Cancer Research
Lab Cancer Genomics
Street address 100 Abbott Park Rd
City Abbott Park
State/province IL
ZIP/Postal code 60064
Country USA
 
Platform ID GPL1261
Series (1)
GSE6858 Expression data from experimental murine asthma
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF Affymetrix Probe_set ID
VALUE expression levels

Data table
ID_REF VALUE
AFFX-BioB-5_at 383.6835697
AFFX-BioB-M_at 475.9704163
AFFX-BioB-3_at 1141.328063
AFFX-BioC-5_at 78.83376367
AFFX-BioC-3_at 107.6717363
AFFX-BioDn-5_at 131.6229098
AFFX-BioDn-3_at 413.5332453
AFFX-CreX-5_at 278.248084
AFFX-CreX-3_at 542.3923299
AFFX-DapX-5_at 537.0223626
AFFX-DapX-M_at 260.0688018
AFFX-DapX-3_at 118.5197888
AFFX-LysX-5_at 151.3558306
AFFX-LysX-M_at 524.429115
AFFX-LysX-3_at 211.7308388
AFFX-PheX-5_at 134.3009707
AFFX-PheX-M_at 706.2218476
AFFX-PheX-3_at 3383.357273
AFFX-ThrX-5_at 659.4430438
AFFX-ThrX-M_at 93.92740533

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM158142.cel.gz 6.0 Mb (ftp)(http) CEL

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