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Samples
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GEO accession:
Sample GSM1596022
Query DataSets for GSM1596022
Status
Public on Jan 29, 2016
Title
A34303
Sample type
genomic
Source name
Guthrie card spot
Organism
Homo sapiens
Characteristics
fas status: Case
ethnicity: White, NonHispanic
gender: Male
Extracted molecule
genomic DNA
Extraction protocol
Not provided
Label
Cy3 and Cy5
Label protocol
Not provided
Hybridization protocol
Not provided
Scan protocol
Not provided
Description
9388306114_R05C02
Data processing
minfi 1.8.9. Raw intensity data from minfi.
Submission date
Jan 29, 2015
Last update date
Jan 29, 2016
Contact name
David McGaughey
E-mail(s)
mcgaugheyd@mail.nih.gov
Organization name
NIH
Department
NHGRI
Lab
Brody
Street address
50 South Drive Rm 5317
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platform ID
GPL13534
Series (1)
GSE65428
DNA methylation analyses in infants reveal signals correlated with fetal alcohol syndrome, maternal smoking, gender, and ethnicity
Data table header descriptions
ID_REF
VALUE
Illumina beta from minfi. SWAN normalization applied.
Data table
ID_REF
VALUE
cg00050873
0.792918291879844
cg00212031
0.047239067985956
cg00213748
0.756735182598284
cg00214611
0.0444918644971993
cg00455876
0.661686307519641
cg01707559
0.0754052985369711
cg02004872
0.011495235246357
cg02011394
0.906385661969781
cg02050847
0.891988105708422
cg02233190
0.0428504171997478
cg02494853
0.0425334149096386
cg02839557
0.0405990970105226
cg02842889
0.0330819507290096
cg03052502
0.966362325804901
cg03155755
0.913952162098695
cg03244189
0.07387674463068
cg03443143
0.86306334699023
cg03683899
0.0229902179850042
cg03695421
0.633527514322854
cg03706273
0.023679145977097
Total number of rows:
485512
Table truncated, full table size
13832 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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