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Scope:
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Samples
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GEO accession:
Sample GSM1596077
Query DataSets for GSM1596077
Status
Public on Jan 29, 2016
Title
B50435
Sample type
genomic
Source name
Guthrie card spot
Organism
Homo sapiens
Characteristics
fas status: Control
ethnicity: White, NonHispanic
gender: Female
Extracted molecule
genomic DNA
Extraction protocol
Not provided
Label
Cy3 and Cy5
Label protocol
Not provided
Hybridization protocol
Not provided
Scan protocol
Not provided
Description
9370847167_R04C01
Data processing
minfi 1.8.9. Raw intensity data from minfi.
Submission date
Jan 29, 2015
Last update date
Jan 29, 2016
Contact name
David McGaughey
E-mail(s)
mcgaugheyd@mail.nih.gov
Organization name
NIH
Department
NHGRI
Lab
Brody
Street address
50 South Drive Rm 5317
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platform ID
GPL13534
Series (1)
GSE65428
DNA methylation analyses in infants reveal signals correlated with fetal alcohol syndrome, maternal smoking, gender, and ethnicity
Data table header descriptions
ID_REF
VALUE
Illumina beta from minfi. SWAN normalization applied.
Data table
ID_REF
VALUE
cg00050873
0.862554638173871
cg00212031
0.241561181434599
cg00213748
0.517437722419929
cg00214611
0.376811594202899
cg00455876
0.428275602409639
cg01707559
0.17304189435337
cg02004872
0.101218262552659
cg02011394
0.922249413684103
cg02050847
0.671729957805907
cg02233190
0.105232388190588
cg02494853
0.0259043125162646
cg02839557
0.293391719745223
cg02842889
0.181050312155711
cg03052502
0.901233243967828
cg03155755
0.871543541064796
cg03244189
0.149236192714454
cg03443143
0.885170255648669
cg03683899
0.163172606568833
cg03695421
0.574441991660535
cg03706273
0.0227498228206945
Total number of rows:
485512
Table truncated, full table size
13836 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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