|
Status |
Public on Dec 09, 2016 |
Title |
A_135 |
Sample type |
RNA |
|
|
Source name |
Blood
|
Organism |
Homo sapiens |
Characteristics |
cohort: Healthy, non-smoking gender: male race: white_caucasian tissue: blood
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted from blood collected in PAXgene tubes using the PAXgene blood miRNA kit
|
Label |
biotin
|
Label protocol |
Total RNA was reverse-transcribed and amplified using the NuGen Ovation™ RNA amplification system V2 with Ovation™WB reagent. Amplified RNA was fragmented and labeled using the NuGen FL-Ovation™ cDNA Biotin Module V2. Amplification and labeling were performed on a Beckman-Coulter ArrayPlex.
|
|
|
Hybridization protocol |
Standard procedure for Affymetrix® GeneTitan™ running Affymetrix GeneChip® Command Console 2.0.
|
Scan protocol |
Standard procedure for Affymetrix® GeneTitan™ running Affymetrix GeneChip® Command Console 2.0.
|
Description |
wbl20381-040
|
Data processing |
Scans were imported into ArrayStudio V8.0 and pre-processed using the default RMA pipeline
|
|
|
Submission date |
Jun 09, 2015 |
Last update date |
Dec 09, 2016 |
Contact name |
Jeannette Bigler |
E-mail(s) |
jeannette.bigler@bjgroupllc.com
|
Organization name |
BJ Group, LLC
|
Street address |
3200 NE 92nd Street
|
City |
Seattle |
State/province |
WA |
ZIP/Postal code |
98115 |
Country |
USA |
|
|
Platform ID |
GPL13158 |
Series (1) |
GSE69683 |
Expression profiling in blood from subjects with severe asthma, moderate asthma, and non-asthmatics collected in the U-BIOPRED study |
|