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Sample GSM1833417 Query DataSets for GSM1833417
Status Public on Jul 01, 2016
Title wt 12 mo lv 1 normalization 2
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics strain: mixed background (FVB/NT, 129S1/Svlmj,C57BL/6NT)
genotype: wildtype
age: 12 months
tissue: liver
normalization: 2
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Affymetrix GeneChip Scanner 3000 was used for data acquisition
Description wt_12mo_lv1.CEL
Gene expression data
Data processing Data was processed using Affymetrix Expression and Transcriptome analysis consoles
 
Submission date Jul 27, 2015
Last update date Jul 01, 2016
Contact name Lindsey N Kent
E-mail(s) lindsey.kent@osumc.edu
Organization name OSU
Department CCC
Lab Leone
Street address 460 W 12th Ave
City Columbus
State/province oh
ZIP/Postal code 43210
Country USA
 
Platform ID GPL1261
Series (2)
GSE71381 E2f regulation of gene expression in the liver [12 mo]
GSE71383 Balanced E2F transcriptional output is essential for tumor suppression in the liver
Relations
Reanalysis of GSM1833400

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 8.755762
1415671_at 10.36372
1415672_at 10.95207
1415673_at 7.278563
1415674_a_at 8.651544
1415675_at 8.222059
1415676_a_at 11.17897
1415677_at 10.49768
1415678_at 10.9491
1415679_at 11.13626
1415680_at 8.979425
1415681_at 10.18233
1415682_at 8.248384
1415683_at 10.67559
1415684_at 9.594152
1415685_at 8.973511
1415686_at 10.51914
1415687_a_at 11.19434
1415688_at 10.72016
1415689_s_at 9.745101

Total number of rows: 45101

Table truncated, full table size 894 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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