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Sample GSM198089 Query DataSets for GSM198089
Status Public on Jun 13, 2007
Title Sample 11270, Slide 32024_D
Sample type RNA
 
Source name Whole Blood
Organism Canis rufus
Characteristics Sample 11270, Slide 32024_D, Female, Free Range
Extracted molecule total RNA
Extraction protocol Whole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction KitWhole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction Kit
Label Biotin
Label protocol Total RNA was biotin labeled using Ambion's Illumina RNA Amplification Kit
 
Hybridization protocol Arrays were hybridized overnight following Illumina's Ref-8 hybridization protocol
Scan protocol Arrays were scanned using Illumina's Beadstation Scanner on the Default settings
Description Whole Blood was collected in EDTA tubes and immediately mixed and stored in RNAlater.
All protocols were followed according to manufacturer's instructions.
Data processing Raw values were extracted from Array images using Illumina's BeadStudio Software Version 1.5.0.34. Normalized VALUEs represent median standardized log base 2 signal intensities.
 
Submission date Jun 05, 2007
Last update date Mar 08, 2012
Contact name Erin Kennerly
E-mail(s) emkenner@unity.ncsu.edu
Phone (919) 513-3090
Organization name NCSU
Street address
City Raleigh
State/province NC
ZIP/Postal code 27695
Country USA
 
Platform ID GPL2700
Series (1)
GSE8020 A gene expression signature of confinement in peripheral blood of red wolves (Canis rufus)

Data table header descriptions
ID_REF
RAW Raw signal intensities
VALUE median standardized log base 2 signal intensities

Data table
ID_REF RAW VALUE
GI_10047089-S 111.9 -0.3574496
GI_10047091-S 417.8 1.54315282
GI_10047093-S 170.8 0.25264831
GI_10047099-S 136.8 -0.0675914
GI_10047103-S 140.4 -0.0301167
GI_10047105-S 165.3 0.20542706
GI_10047121-S 113.9 -0.3318919
GI_10047123-S 211.5 0.560998
GI_10047133-A 134.4 -0.0931265
GI_10047133-I 138.5 -0.0497737
GI_10092578-S 149.7 0.06241455
GI_10092585-S 165 0.20280636
GI_10092596-S 156.1 0.12281087
GI_10092600-S 102.6 -0.4826289
GI_10092602-S 139.9 -0.0352637
GI_10092603-S 218.7 0.60929355
GI_10092611-A 93.3 -0.6197107
GI_10092616-S 128.5 -0.1578913
GI_10092618-S 120.2 -0.2542228
GI_10092638-S 110.8 -0.3717018

Total number of rows: 24354

Table truncated, full table size 724 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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