|
Status |
Public on Jun 10, 2017 |
Title |
102326-34 HBV liver |
Sample type |
RNA |
|
|
Source name |
HBV liver
|
Organism |
Homo sapiens |
Characteristics |
gender: M ethnicity: nonCau
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA was extracted using the QIAGEN RNeasy FFPE Kit following the protocol provided by the manufacturer.
|
Label |
Biotin
|
Label protocol |
Standard Illumina labeling protocol
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Ilumina iScan N240 scanning protocol
|
Description |
Liver gene expression data from chronic HBV infection
|
Data processing |
Primary gene expression data was processed and analyzed using Illumina's Genomestudio v.2010.2 software. Data was normalized using the quantile method
|
|
|
Submission date |
Jun 30, 2016 |
Last update date |
Jun 10, 2017 |
Contact name |
Andre Boonstra |
E-mail(s) |
p.a.boonstra@erasmusmc.nl
|
Organization name |
Erasmus MC
|
Department |
Dept. of Gastroenterology and Hepatology
|
Street address |
Dr. Molewaterplein 40
|
City |
Rotterdam |
ZIP/Postal code |
3015 GD |
Country |
Netherlands |
|
|
Platform ID |
GPL18281 |
Series (1) |
GSE83898 |
Unique liver transcriptomics profiles in chronic HBV: intrinsic intrahepatic functional clusters discriminate distinct clinical phases |
|