|
| Status |
Public on Aug 05, 2016 |
| Title |
Gem2nM52_CAGAGAG-AGAGTAG_L001_RNA-seq |
| Sample type |
SRA |
| |
|
| Source name |
CFPAC-1_Gemcitabine (2nM)_Microraft
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: CFPAC-1
treated with: Gemcitabine (2nM)
isolation: Microraft
num. cells: Unknown
proliferative?: Yes
|
| Extracted molecule |
total RNA |
| Extraction protocol |
ClonTech SMARTer kit
Nextera XT
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina MiSeq |
| |
|
| Description |
RNA
|
| Data processing |
Read alignment using MapSplice 2
Gene expression quantification using RSEM
Genome_build: hg19
Supplementary_files_format_and_content: Gene expression quantification (FPKMs)
|
| |
|
| Submission date |
Aug 04, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Corbin D. Jones |
| E-mail(s) |
cdjones@email.unc.edu
|
| Organization name |
The University of North Carolina at Chapel Hill
|
| Street address |
3159 Genome Sciences Building
|
| City |
Chapel Hill |
| State/province |
NC |
| ZIP/Postal code |
27599 |
| Country |
USA |
| |
|
| Platform ID |
GPL15520 |
| Series (1) |
| GSE85183 |
Selective single cell isolation for genomics using microraft arrays |
|
| Relations |
| BioSample |
SAMN05511322 |
| SRA |
SRX2000014 |
