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Status
Public on Aug 15, 2004
Title
413F
Sample type
RNA
Source name
vastus lateralis
Organism
Homo sapiens Extracted molecule
total RNA
Description
Older (70-80 years old) male subject. Muscle biopsies were performed on the vastus lateralis. RNA was extracted using TriZol and DNA contaminants were removed using a Qiagen kit. Targets were produced using standard Affymetrix procedures from about 75ug of total RNA.
Submission date
May 24, 2004
Last update date
May 27, 2005
Contact name
Susan Kandarian
E-mail(s)
skandar@bu.edu Phone
617-353-7493
Organization name
Boston University
Department
Department of Health Sciences
Street address
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platform ID
GPL96 Series (1)
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
163.3
P
0.015183
AFFX-BioB-M_at
239.7
P
0.006871
AFFX-BioB-3_at
120.5
P
0.004484
AFFX-BioC-5_at
479
P
0.000662
AFFX-BioC-3_at
310.3
P
0.001593
AFFX-BioDn-5_at
432.8
P
0.000509
AFFX-BioDn-3_at
3105.4
P
0.000195
AFFX-CreX-5_at
4804
P
0.000044
AFFX-CreX-3_at
5979.1
P
0.000044
AFFX-DapX-5_at
15.2
A
0.58862
AFFX-DapX-M_at
31.4
A
0.216524
AFFX-DapX-3_at
2.8
A
0.971543
AFFX-LysX-5_at
18.9
A
0.327079
AFFX-LysX-M_at
40.5
A
0.52976
AFFX-LysX-3_at
2.9
A
0.897835
AFFX-PheX-5_at
3.5
A
0.897835
AFFX-PheX-M_at
2.5
A
0.910522
AFFX-PheX-3_at
14.6
A
0.686277
AFFX-ThrX-5_at
9.1
A
0.617401
AFFX-ThrX-M_at
18
A
0.699394
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