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GEO accession:
Sample GSM36797
Query DataSets for GSM36797
Status
Public on Feb 23, 2005
Title
Wong648subA
Sample type
RNA
Source name
Breast
Organism
Homo sapiens
Characteristics
bone relapses (1=yes, 0=no): 1
Extracted molecule
total RNA
Description
RNA was extracted from a fresh-frozen primary breast tumor. Target cRNA was prepared and hybridized using standard Affymetrix procedures. Image was globally scaled to a target intensity of 600.
Submission date
Dec 03, 2004
Last update date
May 31, 2013
Contact name
Tim Jatkoe
E-mail(s)
tjatkoe@vrxus.jnj.com
Phone
(858) 320-3315
Organization name
Veridex
Street address
City
San Diego
State/province
CA
ZIP/Postal code
92121
Country
USA
Platform ID
GPL96
Series (1)
GSE2034
Breast cancer relapse free survival
Relations
Reanalyzed by
GSE31519
Reanalyzed by
GSE47561
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
359.0
P
0.009337
AFFX-BioB-M_at
918.5
P
0.000127
AFFX-BioB-3_at
349.1
P
0.000972
AFFX-BioC-5_at
911.3
P
0.000340
AFFX-BioC-3_at
609.7
P
0.000258
AFFX-BioDn-5_at
804.4
P
0.000110
AFFX-BioDn-3_at
6652.7
P
0.000195
AFFX-CreX-5_at
8726.5
P
0.000044
AFFX-CreX-3_at
12503.5
P
0.000044
AFFX-DapX-5_at
26.2
A
0.250796
AFFX-DapX-M_at
35.1
A
0.327079
AFFX-DapX-3_at
8.3
A
0.876428
AFFX-LysX-5_at
16.7
A
0.514890
AFFX-LysX-M_at
11.4
A
0.645547
AFFX-LysX-3_at
6.8
A
0.617401
AFFX-PheX-5_at
5.4
A
0.941556
AFFX-PheX-M_at
3.7
A
0.941556
AFFX-PheX-3_at
89.9
A
0.588620
AFFX-ThrX-5_at
10.4
A
0.772364
AFFX-ThrX-M_at
42.7
A
0.354453
Total number of rows:
22283
Table truncated, full table size
604 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM36797.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
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