GEO help: Mouse over screen elements for information.
Status
Public on Mar 20, 2009
Title
SAGE_Ovary_endometriosis_CL_E12
Sample type
SAGE
Anchor
NlaIII
Tag Count
76097
Tag Length
10
Source name
ovary, cell line, preneoplasia, endometriosis, short sage, female, adult
Organism
Homo sapiens
Characteristics
organ/tissue: ovary tissue preparation: cell line age: unknown sex: female cell type: Endometriosis
Biomaterial provider
Gogusev/Morin
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 1123 Tagging_enzyme: BsmF I Library_producer: Morin Lab Laboratory: Pat J. Morin References: C. D. Hough et al., Cancer Res 60, 6281-7 (2000) [PUBMED=11103784]
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL4
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15309
Cancer Genome Anatomy Project (CGAP) Human SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
78
1025.01
AAAAAAAAAG
5
65.71
AAAAAAAACA
1
13.14
AAAAAAAAGA
1
13.14
AAAAAAAATG
1
13.14
AAAAAAAATT
1
13.14
AAAAAAAGAA
3
39.42
AAAAAAAGGA
2
26.28
AAAAAAAGGT
1
13.14
AAAAAAATAA
2
26.28
AAAAAAATGA
1
13.14
AAAAAAATGG
1
13.14
AAAAAACGCA
1
13.14
AAAAAACTAC
1
13.14
AAAAAACTCC
1
13.14
AAAAAAGAAA
2
26.28
AAAAAAGCTC
1
13.14
AAAAAATAAA
1
13.14
AAAAAATAGT
1
13.14
AAAAAATGGT
1
13.14
Total number of rows: 25663 Table truncated, full table size 478 Kbytes .Supplementary data files not provided