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GEO accession:
Sample GSM38894
Query DataSets for GSM38894
Status
Public on Jan 14, 2006
Title
SAGE_cortex_intact female mice
Sample type
SAGE
Anchor
NlaIII
Tag Count
188085
Tag Length
10
Source name
parietal cortex
Organism
Mus musculus
Extracted molecule
total RNA
Description
Parietal cortex were dissected from C57BL6 female mice and pooled together. Total RNA was isolated by Trizol.
Keywords = cortex
Keywords = SAGE
Submission date
Jan 13, 2005
Last update date
Nov 19, 2008
Contact name
Yuichiro Nishida
E-mail(s)
ynishida88@hotmail.com
Phone
(717) 531-1028
Fax
(717) 531-1792
Organization name
Penn State College of Medicine
Department
Department of Anatomy and Physiology
Lab
Dr. Ray's Lab
Street address
500 University Drive
City
Hershey
State/province
PA
ZIP/Postal code
17033
Country
USA
Platform ID
GPL11
Series (1)
GSE2156
Sexually dimorphic gene expression in the hypothalamus, pituitary gland and cortex by SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
PERCENT
Data table
TAG
COUNT
TPM
PERCENT
ATGACTGATA
1163
6183.37
0.618337
AGCAGTCCCC
1013
5385.86
0.538586
AGGACAAATA
904
4806.34
0.480634
GTGGCTCACA
867
4609.62
0.460962
GCCTCCAAGG
632
3360.18
0.336018
ACAAACTTAG
624
3317.65
0.331765
CAGCTCTGCC
623
3312.33
0.331233
CCTTTAATCC
609
3237.90
0.32379
GCTGCCCTCC
576
3062.45
0.306245
AACGGCTAAA
490
2605.21
0.260521
ATACTGACAT
472
2509.50
0.25095
CATCCTTGAT
439
2334.05
0.233405
TGGTTGCTGG
417
2217.08
0.221708
CATCGCCAGT
407
2163.92
0.216392
GTATTTGCAA
404
2147.97
0.214797
GAGCGTTTTG
397
2110.75
0.211075
TGTCATCTAG
391
2078.85
0.207885
ATAATACATA
387
2057.58
0.205758
CCTACTAACC
378
2009.73
0.200973
GCTTCGTCCA
375
1993.78
0.199378
Total number of rows:
56784
Table truncated, full table size
1518 Kbytes
.
Supplementary data files not provided
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