|
| Status |
Public on Sep 11, 2019 |
| Title |
pros-Gal4-m8-ChIP_1.fastq |
| Sample type |
SRA |
| |
|
| Source name |
Embryos
|
| Organism |
Drosophila melanogaster |
| Characteristics |
tissue: Embryos, Stage 9-16
sample type: Flag
|
| Treatment protocol |
DNA was extracted from embryos.
|
| Growth protocol |
Drosophila melanogaster embryos, at St9-16, grown at +26C.
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Qiagen Blood and tissue DNA extraction kit. Two independent samples were analyzed for each genotype.
DNA sequencing was performed by (GeneWhiz, New Jersey, NJ, USA), on one lane of the HiSeq2500 with a 1x50bp or 1x100bp single-read sequencing configuration in rapid run mode (V4 chemistry).
|
| |
|
| Library strategy |
ChIP-Seq |
| Library source |
genomic |
| Library selection |
ChIP |
| Instrument model |
Illumina HiSeq 2500 |
| |
|
| Description |
ChIP-seq
|
| Data processing |
DNAstar Seqman NGN software (DNASTAR, Inc. version 12.2) was used for sequence assembly.
Genome_build: dm6
Supplementary_files_format_and_content: QSeq peak
|
| |
|
| Submission date |
Sep 10, 2019 |
| Last update date |
Sep 11, 2019 |
| Contact name |
Stefan Thor |
| E-mail(s) |
s.thor@uq.edu.au
|
| Organization name |
University of Queensland
|
| Department |
School of Biomedical Sciences
|
| Lab |
Thor
|
| Street address |
Skerman Bldg (65) room 506
|
| City |
St Lucia |
| State/province |
QLD |
| ZIP/Postal code |
4072 |
| Country |
Australia |
| |
|
| Platform ID |
GPL17275 |
| Series (1) |
| GSE137195 |
Control of neural daughter cell proliferation by multi-level Notch/Su(H)/E(spl)HLH signaling. (PMID: 27070787) |
|
| Relations |
| BioSample |
SAMN12722839 |
| SRA |
SRX6827252 |
