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Sample GSM4432122 Query DataSets for GSM4432122
Status Public on Mar 25, 2020
Title Muscle_Bas_1008
Sample type RNA
 
Source name Vastus lateralus muscle, baseline
Organism Homo sapiens
Characteristics tissue: muscle
Sex: male
muscle name: Vastus lateralus
time point: baseline
Treatment protocol Subjects consumed a 250-mL beverage containing either 29 casein protein or an isocaloric amount of carbohydrate immediately after cessation of each exercise session (3 per wk) and every day before sleep (7 per wk).
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from the skeletal muscle tissue by using Trizol reagent (Invitrogen, Breda, Netherlands)
Label biotin
Label protocol Total RNA was labelled using an Affymetrix WT plus reagent (Life Technologies, Bleiswijk, Netherlands)
 
Hybridization protocol Total RNA was hybridized to human whole genome Genechip Human Gene 2 (Life Technologies, Bleiswijk, Netherlands)
Scan protocol Sample labelling, hybdridization to chips, and image scanning were performed according manufacturer's instructions (Life technologies, Bleiswijk, Netherlands)
Description Gene expression data from human muscle tissue
G313_H05_022_1008_B_3.CEL (B_P; p1008)
Data processing The data were analyzed using limma R library
 
Submission date Mar 24, 2020
Last update date Mar 25, 2020
Contact name Pim Knuiman
E-mail(s) p.knuiman@leeds.ac.uk
Phone 01133430842
Organization name University of Leeds
Department Biological Sciences
Street address Clarendon Way
City Leeds
ZIP/Postal code LS2 9JT
Country United Kingdom
 
Platform ID GPL28236
Series (1)
GSE147494 Impact of protein on muscle transcriptome to endurance training

Data table header descriptions
ID_REF
VALUE GC-RMA signal

Data table
ID_REF VALUE
2_at 9.187609307
947_at 5.995615049
1282_at 5.534296352
1284_at 6.067311377
3910_at 7.536096371
3912_at 4.114975708
4430_at 9.065670757
7060_at 6.30376528
7837_at 9.849108687
64094_at 4.985756639
6678_at 9.853238385
3490_at 7.556202731
25878_at 5.147406998
2113_at 4.872948425
1306_at 6.82059554
1281_at 5.943996888
4811_at 6.192848808
3339_at 9.422781236
7402_at 6.649537316
3655_at 4.466860495

Total number of rows: 25088

Table truncated, full table size 526 Kbytes.




Supplementary file Size Download File type/resource
GSM4432122_G313_H05_022_1008_B_3.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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