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Sample GSM478223 Query DataSets for GSM478223
Status Public on Dec 03, 2009
Title CHOP1848
Sample type RNA
 
Source name tumor RNA
Organism Homo sapiens
Characteristics tissue type: neuroblastoma
tissue type: primary tumor
mycn status: 2
gender: 2
inss: 5
risk: 3
ploidy: 2
age: 848
shimada: 4
Treatment protocol Illumina Human 6 expression Bead chip standard protocol
Growth protocol Illumina Human 6 expression Bead chip standard protocol
Extracted molecule total RNA
Extraction protocol Trizol RNA extraction reagent protocol
Label biotin
Label protocol Illumina Human 6 expression Bead chip standard protocol
 
Hybridization protocol Illumina Human 6 expression Bead chip standard protocol
Scan protocol Illumina Human 6 expression Bead chip standard protocol
Description N/A
Data processing Illumina Human 6 expression Bead chip standard protocol
 
Submission date Dec 02, 2009
Last update date Dec 02, 2009
Contact name Jayanti Jagannathan
E-mail(s) jagannathan@email.chop.edu
Phone 2674262286
Organization name Childrens Hospital of Philadelphia
Department Oncology
Street address 34th & Civic center blvd
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platform ID GPL6102
Series (1)
GSE19274 Expression profiling in Neuroblastoma Primary tumors and Cell lines

Data table header descriptions
ID_REF
VALUE signal - expression signal
Detection Pval pvalue of the signal detected

Data table
ID_REF VALUE Detection Pval
ILMN_1809034 127.5295 0
ILMN_1660305 132.7874 0
ILMN_1792173 394.892 0
ILMN_1762337 85.39777 0.5121951
ILMN_1736007 98.75549 0.1337768
ILMN_1787689 100.8102 0.1042129
ILMN_1731507 98.18541 0.1433851
ILMN_1814316 146.0841 0
ILMN_1745607 2955.802 0
ILMN_1757454 95.95625 0.1980783
ILMN_1668111 219.9886 0
ILMN_1735045 114.6163 0.003695491
ILMN_1680754 95.13074 0.2084257
ILMN_1659452 86.62391 0.4611973
ILMN_1767388 100.3408 0.1138211
ILMN_1673870 85.59361 0.5055432
ILMN_1675204 109.0522 0.01995565
ILMN_1755321 188.7655 0
ILMN_1698554 300.3128 0
ILMN_1814092 98.53625 0.1396896

Total number of rows: 48701

Table truncated, full table size 1405 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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