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Sample GSM48135 Query DataSets for GSM48135
Status Public on Apr 29, 2005
Title Genome wide transcriptional oscillation gates DNA replication AFFY1_5
Sample type RNA
 
Source name time series sampling continuous gated synchrony yeast culture
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Description Time series , cycle 1, sample 5, phase 343.8 degrees
This sample is also known as AFFY1_5.
Sample_strain: IFO 0233 diploid
Keywords = oscillation, attractor, DNA-replication, redox gating, quantized,
 
Submission date Apr 12, 2005
Last update date May 27, 2005
Contact name Robert R Klevecz
E-mail(s) rklevecz@coh.org
Phone 6263018348
Organization name Beckman Research Institute of the City of Hope
Department Biology
Lab Cellular Dynamics
Street address 1450 E. Duarte Rd.
City Duarte
State/province CA
ZIP/Postal code 91010
Country USA
 
Platform ID GPL90
Series (1)
GSE2583 Genome_Wide_Oscillations_in_Yeast

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 6.9 A 0.843268
AFFX-MurIL10_at 3 A 0.868639
AFFX-MurIL4_at 4.2 A 0.672921
AFFX-MurFAS_at 2.9 A 0.868639
AFFX-BioB-5_at 119.9 A 0.0727
AFFX-BioB-M_at 93 P 0.001593
AFFX-BioB-3_at 115.4 P 0.009337
AFFX-BioC-5_at 188.1 P 0.002023
AFFX-BioC-3_at 149.3 P 0.006187
AFFX-BioDn-5_at 107.4 P 0.000127
AFFX-BioDn-3_at 1209.3 P 0.000044
AFFX-CreX-5_at 2101.3 P 0.00006
AFFX-CreX-3_at 3096.7 P 0.000044
AFFX-BioB-5_st 6.2 A 0.58862
AFFX-BioB-M_st 7 A 0.737173
AFFX-BioB-3_st 3.2 A 0.883887
AFFX-BioC-5_st 10.5 A 0.686277
AFFX-BioC-3_st 3.7 A 0.814869
AFFX-BioDn-5_st 23 A 0.783476
AFFX-BioDn-3_st 22 A 0.470241

Total number of rows: 9335

Table truncated, full table size 224 Kbytes.




Supplementary data files not provided

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