GEO help: Mouse over screen elements for information.
Status
Public on Apr 29, 2005
Title
Genome wide transcriptional oscillation gates DNA replication AFFY1_5
Sample type
RNA
Source name
time series sampling continuous gated synchrony yeast culture
Organism
Saccharomyces cerevisiae
Extracted molecule
total RNA
Description
Time series , cycle 1, sample 5, phase 343.8 degrees This sample is also known as AFFY1_5. Sample_strain: IFO 0233 diploid Keywords = oscillation, attractor, DNA-replication, redox gating, quantized,
Submission date
Apr 12, 2005
Last update date
May 27, 2005
Contact name
Robert R Klevecz
E-mail(s)
rklevecz@coh.org
Phone
6263018348
Organization name
Beckman Research Institute of the City of Hope
Department
Biology
Lab
Cellular Dynamics
Street address
1450 E. Duarte Rd.
City
Duarte
State/province
CA
ZIP/Postal code
91010
Country
USA
Platform ID
GPL90
Series (1)
GSE2583
Genome_Wide_Oscillations_in_Yeast
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
6.9
A
0.843268
AFFX-MurIL10_at
3
A
0.868639
AFFX-MurIL4_at
4.2
A
0.672921
AFFX-MurFAS_at
2.9
A
0.868639
AFFX-BioB-5_at
119.9
A
0.0727
AFFX-BioB-M_at
93
P
0.001593
AFFX-BioB-3_at
115.4
P
0.009337
AFFX-BioC-5_at
188.1
P
0.002023
AFFX-BioC-3_at
149.3
P
0.006187
AFFX-BioDn-5_at
107.4
P
0.000127
AFFX-BioDn-3_at
1209.3
P
0.000044
AFFX-CreX-5_at
2101.3
P
0.00006
AFFX-CreX-3_at
3096.7
P
0.000044
AFFX-BioB-5_st
6.2
A
0.58862
AFFX-BioB-M_st
7
A
0.737173
AFFX-BioB-3_st
3.2
A
0.883887
AFFX-BioC-5_st
10.5
A
0.686277
AFFX-BioC-3_st
3.7
A
0.814869
AFFX-BioDn-5_st
23
A
0.783476
AFFX-BioDn-3_st
22
A
0.470241
Total number of rows: 9335 Table truncated, full table size 224 Kbytes .Supplementary data files not provided