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GEO accession:
Sample GSM52664
Query DataSets for GSM52664
Status
Public on Dec 20, 2005
Title
28n
Sample type
RNA
Source name
Trizol extracted total RNA from myometrium tissue. Trizol extracted total RNA from myometrium tissue.
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Myometrium tissue.
Submission date
May 30, 2005
Last update date
Dec 20, 2005
Contact name
Sakari Vanharanta
E-mail(s)
sakari.vanharanta@helsinki.fi
Organization name
University of Helsinki
Department
Translational Cancer Medicine Program
Lab
Vanharanta
Street address
Haartmaninkatu 8
City
Helsinki
ZIP/Postal code
00014
Country
Finland
Platform ID
GPL96
Series (1)
GSE2724
The effect of FH mutations on fibroid expression profile, normal myometrium vs. FH-mutant fibroids.
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Algorithm (mean scaled to 100)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call (Alpha1 = 0.05, Alpha2 = 0.065)
DETECTION P-VALUE
MAS 5.0 Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
92.4
P
0.006871
AFFX-BioB-M_at
126.8
P
0.000754
AFFX-BioB-3_at
66.4
P
0.000972
AFFX-BioC-5_at
231.6
P
0.000258
AFFX-BioC-3_at
147.9
P
0.00011
AFFX-BioDn-5_at
177.2
P
0.00007
AFFX-BioDn-3_at
1068.2
P
0.000147
AFFX-CreX-5_at
2184.3
P
0.000044
AFFX-CreX-3_at
3204.2
P
0.000044
AFFX-DapX-5_at
1.7
A
0.425962
AFFX-DapX-M_at
13
A
0.156732
AFFX-DapX-3_at
2.5
A
0.804734
AFFX-LysX-5_at
9.4
A
0.262827
AFFX-LysX-M_at
15.8
A
0.300606
AFFX-LysX-3_at
6.5
A
0.227636
AFFX-PheX-5_at
11.7
A
0.239063
AFFX-PheX-M_at
2.4
A
0.699394
AFFX-PheX-3_at
12.6
A
0.368438
AFFX-ThrX-5_at
17.8
A
0.382599
AFFX-ThrX-M_at
1.4
A
0.860518
Total number of rows:
22283
Table truncated, full table size
580 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM52664.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
GSM52664.EXP.gz
483 b
(ftp)
(http)
EXP
GSM52664.RPT.gz
946 b
(ftp)
(http)
RPT
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