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GEO accession:
Sample GSM646227
Query DataSets for GSM646227
Status
Public on Dec 27, 2010
Title
cx.tg.cntr.4
Sample type
RNA
Source name
cortex RNA
Organism
Mus musculus
Characteristics
strain: CBA x C57BL/6
tissue: brain
brain region: cx
genotype: tg
treatment: cntr
gender: m
Treatment protocol
HDACi 4b (1 mg/ml) was administered for 67 days in solutions that replaced drinking water beginning at 4 months of age.
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Illumina protocol
Scan protocol
Illumina protocol
Description
4068838008_G
Data processing
BeadStudio, quantile normalization. 1 sample (cb.wt.cntr.3 [4068838009_C]) was a technical outlier and was excluded from the analysis.
Submission date
Dec 27, 2010
Last update date
Dec 27, 2010
Contact name
Giovanni Coppola
E-mail(s)
gcoppola@ucla.edu
Phone
310-794-4172
Organization name
UCLA
Department
Psychiatry and Neurology
Lab
Neurogenetics
Street address
1524 Gonda, 695 Charles Young Drive South
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL6103
Series (1)
GSE26317
The HDAC inhibitor 4b ameliorates the disease phenotype and transcriptional abnormalities in Huntington's disease transgenic mice
Data table header descriptions
ID_REF
VALUE
Log2 transformed, quantile normalized expresssion levels
Data table
ID_REF
VALUE
ILMN_2674533
8.280531804
ILMN_1230479
7.305988607
ILMN_2592844
6.977872103
ILMN_2619826
8.863393513
ILMN_1215893
9.415532438
ILMN_1250986
6.723661041
ILMN_2777265
6.445278358
ILMN_1238115
6.375977264
ILMN_2732092
8.090490603
ILMN_1231752
6.652943914
ILMN_1229397
9.653894408
ILMN_1225873
12.92224371
ILMN_2682763
6.867492199
ILMN_1251148
6.849474972
ILMN_2691286
6.304637672
ILMN_2681321
9.609755077
ILMN_2687446
9.908171344
ILMN_2598213
7.802173235
ILMN_2728484
6.546313791
ILMN_2748584
10.97606613
Total number of rows:
24613
Table truncated, full table size
597 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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