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Sample GSM665044 Query DataSets for GSM665044
Status Public on Oct 21, 2011
Title BT549 miR203 Rep1
Sample type RNA
 
Channel 1
Source name BT549 miR203 Overexpression Rep1
Organism Homo sapiens
Characteristics cell line: BT549
overexpression: miR203
Extracted molecule total RNA
Extraction protocol According to the manufacturer's protocol
Label Cy5
Label protocol According to the manufacturer's protocol
 
Channel 2
Source name BT549 miR203 Control Overexpression Rep1
Organism Homo sapiens
Characteristics cell line: BT549
overexpression: control scrambled small RNA
Extracted molecule total RNA
Extraction protocol According to the manufacturer's protocol
Label Cy3
Label protocol According to the manufacturer's protocol
 
 
Hybridization protocol According to the manufacturer's protocol
Scan protocol Scanned on Agilent Technologies Scanner G2505B Images were quantified using Agilent Feature Extraction Software
Data processing LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Red signal/processed Green signal. Agilent software was used.
 
Submission date Feb 01, 2011
Last update date Oct 21, 2011
Contact name Christopher Maher
E-mail(s) chrmaher@med.umich.edu
Phone 734-764-3336
Organization name Michigan Center for Translational Pathology
Street address 1500 E. Medical Center Drive
City Ann Arbor
State/province MI
ZIP/Postal code 48105
Country USA
 
Platform ID GPL4133
Series (1)
GSE26996 Coordinated regulation of polycomb group complexes through microRNAs in cancer

Data table header descriptions
ID_REF
VALUE -INV_VALUE: LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Green signal/processed Red signal (test/reference)
INV_VALUE LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Red signal/processed Green signal

Data table
ID_REF VALUE INV_VALUE
12 0.81839 -0.818390041
13 -1.27849 1.27849453
14 -0.556699 0.556699183
15 0 0
16 0.442385 -0.442385116
17 0 0
18 0.684474 -0.684473922
19 0.181381 -0.181380914
20 0 0
21 0 0
22 -0.166341 0.166341359
23 0.419636 -0.419636077
24 -0.0341454 0.034145438
26 -1.50673 1.506733868
27 1.11732 -1.117317577
28 0 0
29 0 0
30 1.09801 -1.09801281
31 -0.78346 0.783460203
32 0.671044 -0.67104383

Total number of rows: 41000

Table truncated, full table size 936 Kbytes.




Supplementary file Size Download File type/resource
GSM665044_miR203_1.txt.gz 14.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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