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Sample GSM665053 Query DataSets for GSM665053
Status Public on Oct 21, 2011
Title BT549 miR-181a Rep2
Sample type RNA
 
Channel 1
Source name BT549 miR-181a Overexpression Rep2
Organism Homo sapiens
Characteristics cell line: BT549
overexpression: miR-181a
Extracted molecule total RNA
Extraction protocol According to the manufacturer's protocol
Label Cy5
Label protocol According to the manufacturer's protocol
 
Channel 2
Source name BT549 miR-181a Control Overexpression Rep2
Organism Homo sapiens
Characteristics cell line: BT549
overexpression: control scrambled small RNA
Extracted molecule total RNA
Extraction protocol According to the manufacturer's protocol
Label Cy3
Label protocol According to the manufacturer's protocol
 
 
Hybridization protocol According to the manufacturer's protocol
Scan protocol Scanned on Agilent Technologies Scanner G2505B Images were quantified using Agilent Feature Extraction Software
Data processing LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Red signal/processed Green signal. Agilent software was used.
 
Submission date Feb 01, 2011
Last update date Oct 21, 2011
Contact name Christopher Maher
E-mail(s) chrmaher@med.umich.edu
Phone 734-764-3336
Organization name Michigan Center for Translational Pathology
Street address 1500 E. Medical Center Drive
City Ann Arbor
State/province MI
ZIP/Postal code 48105
Country USA
 
Platform ID GPL4133
Series (1)
GSE26996 Coordinated regulation of polycomb group complexes through microRNAs in cancer

Data table header descriptions
ID_REF
VALUE -INV_VALUE: LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Green signal/processed Red signal (test/reference)
INV_VALUE LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Red signal/processed Green signal

Data table
ID_REF VALUE INV_VALUE
12 0.734441 -0.734440744
13 0.38741 -0.387409997
14 0.175866 -0.175865777
15 -0.0306851 0.030685067
16 0 0
17 0.0842961 -0.084296112
18 0.747514 -0.747514158
19 -0.471777 0.471777334
20 0 0
21 0 0
22 0.00455094 -0.004550944
23 0 0
24 0.684144 -0.684143784
26 -1.21124 1.211243469
27 -1.24248 1.242483656
28 0 0
29 0 0
30 -0.170515 0.170514939
31 0.198642 -0.19864226
32 0.206163 -0.206163178

Total number of rows: 41000

Table truncated, full table size 921 Kbytes.




Supplementary file Size Download File type/resource
GSM665053_miR181a_2.txt.gz 14.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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