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Sample GSM6697265 Query DataSets for GSM6697265
Status Public on Jan 24, 2023
Title DSP-0509-2
Sample type RNA
 
Source name CT26 tumor
Organism Mus musculus
Characteristics tissue: CT26 tumor
treatment: DSP-0509
Treatment protocol DSP-0509 was dosed with 5 mg/kg i.v. and anti PD-1 antibody was dosed with 200ug/mouse. Tumors were resected 4 days after dosing.
Growth protocol 1x10^6 cells of CT26 were inoculated into dorsal frank in Balb/c mouse. When tumor volume reached 130-170mm^3, mice were assigned to each group.
Extracted molecule total RNA
Extraction protocol total RNA from in vivo CT26 tumors were extracted by using Maxwell RSC simply RNA tissue kit.
Label n/a
Label protocol RNA was lebeled / hybridized with gene specific fluorescent probe using nCounter PanCancer Mouse Immune Profiling kit as descrived in protocol by vendor
 
Hybridization protocol RNA was lebeled / hybridized with gene specific fluorescent probe using nCounter PanCancer Mouse Immune Profiling kit as descrived in protocol by vendor
Scan protocol Fluorescent signal was scanned by using nCounter MAX Analysis system as described in protocol by vendor
Data processing Raw data was normalized by normalization module within nCounter Advanced Analysis 2.0. Probes for normalization were selected based on algolizum within normalization module
 
Submission date Oct 31, 2022
Last update date Jan 24, 2023
Contact name Yosuke Ota
E-mail(s) se3pf30@gmail.com
Organization name Sumitomo Pharma
Department Cancer Research Unit
Street address 3-1-98 Kasugade-naka konohanaku
City Osaka
State/province Osaka
ZIP/Postal code 554-0022
Country Japan
 
Platform ID GPL30298
Series (1)
GSE216890 nCounter PanCancer mouse immune profiling in CT26-bearing mouse tumor treated with DSP-0509 combined with anti PD-1 antibody

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
A2m 12.11
Abca1 1130.09
Abcb1a 936.31
Abcg1 508.68
Abl1 787.24
Ada 179.81
Adora2a 22.36
Aicda 8.38
Aire 19.56
Akt3 1376.98
Alcam 204.03
Ambp 15.84
Amica1 635.38
Angpt1 11.18
Angpt2 429.49
Anp32b 10821.1
Anxa1 7716.84
Apoe 11779.76
App 4953.57
Arg1 797.49

Total number of rows: 784

Table truncated, full table size 9 Kbytes.




Supplementary file Size Download File type/resource
GSM6697265_20181107_NC9472-01_NC9472-005_05.RCC.gz 8.6 Kb (ftp)(http) RCC
Processed data included within Sample table

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