GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM74399
Query DataSets for GSM74399
Status
Public on Oct 14, 2005
Title
HUD-FKRP-6bUA-s2
Sample type
RNA
Source name
Human skeletal muscle
Organism
Homo sapiens
Characteristics
LGMD2I
Extracted molecule
total RNA
Label
biotin
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
LGMD2I (FKRP): male patient 45 years old; RNA extracted from muscle biopsy, which was flash-frozen in isopentane cooled in liquid nitrogen immediately after excision
Data processing
Affymetrix MAS5.0
Submission date
Sep 14, 2005
Last update date
Oct 01, 2019
Contact name
Eric P Hoffman
E-mail(s)
ericphoffman@gmail.com
Organization name
Binghamton University - SUNY
Department
Pharmaceutical Sciences
Street address
PO Box 6000
City
Binghamton
State/province
NY
ZIP/Postal code
13902
Country
USA
Platform ID
GPL96
Series (1)
GSE3307
Comparative profiling in 13 muscle disease groups
Data table header descriptions
ID_REF
VALUE
SIGNAL MAS5.0
ABS_CALL
Presence or Absence of gene transcript in sample
Data table
ID_REF
VALUE
ABS_CALL
1007_s_at
2614.556640625
P
1053_at
198.35452270507812
A
117_at
461.44354248046875
P
121_at
3309.348876953125
P
1255_g_at
173.23048400878906
A
1294_at
1039.2406005859375
P
1316_at
180.83596801757812
A
1320_at
112.40853118896484
A
1405_i_at
29.543012619018555
A
1431_at
298.0724182128906
P
1438_at
126.2325210571289
A
1487_at
2213.619384765625
P
1494_f_at
701.142578125
P
1598_g_at
8183.5908203125
P
160020_at
846.18603515625
P
1729_at
593.6422119140625
A
1773_at
403.1155700683594
A
177_at
90.72146606445312
A
179_at
3063.486328125
P
1861_at
537.8125
A
Total number of rows:
22283
Table truncated, full table size
670 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM74399.CEL.gz
3.9 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
