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Sample GSM754565 Query DataSets for GSM754565
Status Public on Jul 07, 2011
Title blood 4g T25 ppF
Sample type RNA
 
Source name blood 4g T25 ppF
Organism Homo sapiens
Characteristics donor: F
Sex: F
tissue: blood
treatment: 4g APAP exposure
time: 25h
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the PAXgene Blood RNA kit (PreAnalytiX/Qiagen) according to the manufacturers protocol (including Dnase) and was globin reduced using the GLOBINclear kit (Ambion) according to the manufacturers protocol
Label biotin
Label protocol We used standard Affymetrix labeling protocols
 
Hybridization protocol We used standard Affymetrix hybridisation rotocols
Scan protocol We used standard Affymetrix scanning parameters
Description globin reduced total RNA
sample 4g APAP exposure
Data processing All samples were normalized by RMA algorithm and analyzed by SAM (FC>1.5 and FDR<10%).
 
Submission date Jul 05, 2011
Last update date Jul 07, 2011
Contact name marlon jetten
E-mail(s) marlon.jetten@maastrichtuniversity.nl
Organization name maastricht university
Street address universiteitssingel 50
City Maastricht
ZIP/Postal code 6200MD
Country Netherlands
 
Platform ID GPL10526
Series (1)
GSE30418 Low dose human APAP exposure

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1_at 76.5756653
10_at 24.96528706
100_at 300.802652
1000_at 33.00253946
10000_at 12.04757992
10001_at 174.294943
10002_at 18.85262875
10003_at 7.500251473
10004_at 87.09718283
100048912_at 10.61549419
100049716_at 115.5828915
10005_at 200.2144488
10006_at 598.6920575
10007_at 284.7634876
10008_at 288.1941538
10009_at 166.2827407
100093630_at 119.3291671
1001_at 30.16365416
10010_at 280.5590567
100101467_at 59.04374256

Total number of rows: 17788

Table truncated, full table size 361 Kbytes.




Supplementary file Size Download File type/resource
GSM754565_ppFt_25_HG-U133_Plus_2_.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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