|
| Status |
Public on Dec 11, 2011 |
| Title |
LNCaP_abl cells treated with ethanol for 48 hours |
| Sample type |
RNA |
| |
|
| Source name |
LNCaP_abl cells grown in 10%FCS treated with vehicle
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: LNCaP-abl
treatment: vehicle (Ethanol)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA extracted using Trizol following manufacturer's instructions
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
5701666057_A
LNCaP_abl_Ethl
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| Data processing |
The bead-level data were preprocessed using GenomeStudio (Illumina) and the expression data was analyzed using the beadarray package in Bioconductor, log2 transformed and quantile normalized using the beadarray package.
|
| |
|
| Submission date |
Sep 08, 2011 |
| Last update date |
May 17, 2012 |
| Contact name |
Jindan Yu |
| E-mail(s) |
jindan-yu@northwestern.edu
|
| Organization name |
Northwestern University
|
| Department |
Medicine - Hem/Onc
|
| Lab |
Yu
|
| Street address |
303 E. Superior St.
|
| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60611 |
| Country |
USA |
| |
|
| Platform ID |
GPL10558 |
| Series (1) |
| GSE31978 |
Cooperation between Androgen Receptor and Polycomb in oncogenic transformation |
|
