|
| Status |
Public on Sep 01, 2012 |
| Title |
WMG300 ETIC-2 |
| Sample type |
RNA |
| |
|
| Source name |
epithelial tumor initiating cell culture
|
| Organism |
Mus musculus |
| Characteristics |
cell type: monolayer cultured cell in presence of ROCK inhbitor
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with the Macherey-Nagel NucleoSpin RNA II kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
streptavidin Cy3
|
| Label protocol |
As suggested by illumina
|
| |
|
| Hybridization protocol |
As recommended by illumina
|
| Scan protocol |
As suggested by illumina using the illumina scanner
|
| Description |
ETIC replicate 4
5773678003_F
|
| Data processing |
Raw data filtered on P value for <0.05 with the remaining data normalised using the affy tools R bioconductor normalize.quantiles routine
|
| |
|
| Submission date |
Nov 03, 2011 |
| Last update date |
Sep 01, 2012 |
| Contact name |
Roy M Williams |
| E-mail(s) |
rwillia@scripps.edu
|
| Organization name |
The Scripps Research Institute
|
| Department |
Regenerative Medicine
|
| Lab |
Loring
|
| Street address |
3030 Science Park Road
|
| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92037 |
| Country |
USA |
| |
|
| Platform ID |
GPL6885 |
| Series (1) |
| GSE33433 |
Comparison of mouse epithelial tumor initiating cells to mesenchymal tumor initiating cells generated by EMT |
|
