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GEO accession:
Sample GSM85604
Query DataSets for GSM85604
Status
Public on Jul 14, 2006
Title
BE-2
Sample type
SAGE
Anchor
NlaIII
Tag Count
123995
Tag Length
10
Source name
bronchial epithelium
Organism
Homo sapiens
Characteristics
bronchial epithelium
Extracted molecule
polyA RNA
Description
bronchial brushing
Submission date
Nov 30, 2005
Last update date
Nov 19, 2008
Contact name
Kim Marie Lonergan
E-mail(s)
klonergan@bccrc.ca
Phone
604-675-8111
Fax
604-675-8185
Organization name
British Columbia Cancer Research Centre
Department
Cancer Genetics and Developmental Biology
Lab
Dr. Wan L Lam
Street address
675 West 10th Avenue
City
Vancouver
State/province
British Columbia
ZIP/Postal code
V5Z 1L3
Country
Canada
Platform ID
GPL4
Series (2)
GSE3707
Expression profiling of bronchial epithelium
GSE3754
Identification of novel lung genes in bronchial epithelium by serial analysis of gene expression
Data table header descriptions
TAG
10 nucleotide unique SAGE tag sequence
COUNT
raw tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
CCTATCAGTA
1765
14234.44
CTTTGAGTCC
1660
13387.64
CTCCACCCGA
1235
9960.08
ACTTTTTCAA
1073
8653.57
CACCTAATTG
810
6532.52
TTCATACACC
787
6347.03
AAAAAAAAAA
778
6274.45
TAGGTTGTCT
709
5717.97
TTGGGGTTTC
684
5516.35
GTGATCAGCT
672
5419.57
CCCATCGTCC
658
5306.67
GGCCCAGGCC
600
4838.90
TTCAATAAAA
529
4266.30
CCAAGGTGGC
464
3742.09
GTTGTGGTTA
448
3613.05
TTGGTCCTCT
427
3443.69
ATAATTCTTT
407
3282.39
TAATAAAGGT
374
3016.25
TAAAAAAAAA
338
2725.92
GAGGGAGTTT
328
2645.27
Total number of rows:
32808
Table truncated, full table size
590 Kbytes
.
Supplementary data files not provided
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