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Sample GSM926485 Query DataSets for GSM926485
Status Public on May 06, 2012
Title HSCC_Low_695
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.5348105846661 7588.8 1637.98694956462 0 46
ILMN_2721178 10.6784386231298 2011.9 563.375090863095 0 45
ILMN_3033922 10.8176055637128 2231.7 517.930484293018 0 40
ILMN_3092673 12.5252932179229 7540.2 2061.304 0 49
ILMN_2816356 9.27725505865548 567.6 164.755537193747 0.05388 39
ILMN_2808939 10.8824092248038 2343.5 794.872874867422 0 32
ILMN_2634564 10.3925640186664 1591.6 346.619879262572 0 28
ILMN_2737647 9.16849135354527 496.3 196.80084787673 0.35213 29
ILMN_2734484 11.4551114197033 3600 830.449999815763 0 34
ILMN_2952292 9.26948623112719 562.7 171.898683450456 0.0614 47
ILMN_2699078 9.15094936183622 485 152.272877374797 0.44486 44
ILMN_1213681 9.83790487867677 997.3 237.305035766205 0 32
ILMN_2735413 9.18275849517264 505.7 131.437008486955 0.2782 32
ILMN_2735415 9.13758990401753 476.5 167.672761842823 0.50627 46
ILMN_2891688 11.1588771696652 2878.4 452.692924980058 0 23
ILMN_2637698 11.3229699425429 3284.3 749.028 0 36
ILMN_2674228 9.94303858637515 1098.7 312.326199874426 0 38
ILMN_2601546 9.24143579448023 544.3 165.070893860789 0.1015 40
ILMN_1230831 9.31260493428208 590.9 197.156268754001 0.03133 29
ILMN_2848071 9.27604988759462 566.9 177.785723273833 0.05388 34

Total number of rows: 25697

Table truncated, full table size 1530 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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