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Sample GSM990101 Query DataSets for GSM990101
Status Public on Nov 21, 2012
Title age 43y 5034
Sample type genomic
 
Source name X5034
Organism Homo sapiens
Characteristics age (y): 43
source: Utah
plate: 5
gender: F
ethnicity: Hispanic - Mexican
tissue: whole blood
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified Qiagen FlexiGene DNA kit
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description whole blood
Data processing BeadStudio software v3.2
 
Submission date Aug 21, 2012
Last update date Nov 21, 2012
Contact name Justin Guinney
E-mail(s) justin.guinney@sagebase.org
Organization name Sage Bionetworks
Street address 2606 E Roy St
City Seattle
State/province WA
ZIP/Postal code 98110
Country USA
 
Platform ID GPL13534
Series (1)
GSE40279 Genome-wide Methylation Profiles Reveal Quantitative Views of Human Aging Rates

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg13869341 0.8154978
cg14008030 0.5196638
cg12045430 0.07310033
cg20826792 0.2384043
cg00381604 0.02637355
cg20253340 0.5812542
cg21870274 0.7270893
cg03130891 0.02158679
cg24335620 0.6893489
cg16162899 0.9441112
cg17149495 0.8865792
cg22802167 0.9202778
cg24669183 0.8116255
cg17308840 0.3809732
cg17866181 0.8822778
cg24159721 0.1396845
cg15174812 0.100528
cg08477687 0.3531341
cg00034556 0.2257433
cg00645010 0.1175719

Total number of rows: 473034

Table truncated, full table size 9746 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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