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Sample GSM990348 Query DataSets for GSM990348
Status Public on Nov 21, 2012
Title age 76y 6048
Sample type genomic
 
Source name X6048
Organism Homo sapiens
Characteristics age (y): 76
source: USC
plate: 6
gender: M
ethnicity: Hispanic - Mexican
tissue: whole blood
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified Qiagen FlexiGene DNA kit
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description whole blood
Data processing BeadStudio software v3.2
 
Submission date Aug 21, 2012
Last update date Nov 21, 2012
Contact name Justin Guinney
E-mail(s) justin.guinney@sagebase.org
Organization name Sage Bionetworks
Street address 2606 E Roy St
City Seattle
State/province WA
ZIP/Postal code 98110
Country USA
 
Platform ID GPL13534
Series (1)
GSE40279 Genome-wide Methylation Profiles Reveal Quantitative Views of Human Aging Rates

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg13869341 0.7532027
cg14008030 0.5725116
cg12045430 0.03861903
cg20826792 0.08099603
cg00381604 0.01458363
cg20253340 0.6383474
cg21870274 0.697899
cg03130891 0.1572082
cg24335620 0.8750474
cg16162899 0.9104185
cg17149495 0.8967873
cg22802167 0.8865196
cg24669183 0.8825203
cg17308840 0.297616
cg17866181 0.8253942
cg24159721 0.1357977
cg15174812 0.1487229
cg08477687 0.2257596
cg00034556 0.2804246
cg00645010 0.08737209

Total number of rows: 473034

Table truncated, full table size 9726 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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