GEO help: Mouse over screen elements for information.
Status
Public on Mar 10, 2006
Title
isoflurane 02
Sample type
RNA
Source name
basolateral amygdala
Organism
Rattus norvegicus Characteristics
male, 275-300g
Extracted molecule
total RNA
Label
fluorscent label via ENZO BioArray RNA Transcript Labeling Kit
Description
Fear conditioning in rats leads to long term memory (LTM) formation. A central substrate for this type of LTM is the basolateral amygdala. We sought the expression changes specific to LTM at 6h following pain (a component of conditioning), following anesthesia with isoflurane (a general anesthetic and an effective amnestic agent), and following conditioning during isoflurane. For this also see GSE1779.
Data processing
raw data from Affymetrix
Submission date
Mar 09, 2006
Last update date
Mar 10, 2006
Contact name
Achim Bell
E-mail(s)
Achim.Bell@stonybrook.edu Organization name
SUNY Stony Brook
Department
Anesthesiology
Street address
101 Nicolls Road
City
Stony Brook
State/province
NY
ZIP/Postal code
11794-8480
Country
USA
Platform ID
GPL341 Series (1)
GSE1779 Effect of Isoflurane and LTM on basolateral amygdala
Data table header descriptions ID_REF VALUE ‘signal’ a measure of the abundance of a transcript
ABS_CALL the call in absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE ‘detection p-value’, p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-TrpnX-M_at
3.1
A
0.897835
AFFX-TrpnX-5_at
13.9
A
0.425962
AFFX-TrpnX-3_at
8.5
A
0.455413
AFFX-ThrX-M_at
27.4
A
0.216524
AFFX-ThrX-5_at
5.3
A
0.897835
AFFX-ThrX-3_at
4.9
A
0.987453
AFFX-r2-P1-cre-5_at
12956.7
P
0.000244
AFFX-r2-P1-cre-3_at
15629.3
P
0.000244
AFFX-r2-Ec-bioD-5_at
2137.3
P
0.000244
AFFX-r2-Ec-bioD-3_at
2643.6
P
0.000244
AFFX-r2-Ec-bioC-5_at
514.3
P
0.000244
AFFX-r2-Ec-bioC-3_at
776.7
P
0.000244
AFFX-r2-Ec-bioB-M_at
361
P
0.000244
AFFX-r2-Ec-bioB-5_at
177.5
P
0.000244
AFFX-r2-Ec-bioB-3_at
278.1
P
0.000244
AFFX-r2-Bs-thr-M_s_at
19.5
A
0.466064
AFFX-r2-Bs-thr-5_s_at
33.3
A
0.303711
AFFX-r2-Bs-thr-3_s_at
55.5
A
0.5
AFFX-r2-Bs-phe-M_at
66.8
A
0.303711
AFFX-r2-Bs-phe-5_at
44.1
A
0.246094
15923 429 Kbytes .Supplementary data files not provided
