U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Mup6 major urinary protein 6 [ Mus musculus (house mouse) ]

    Gene ID: 620807, updated on 8-Feb-2024

    Summary

    Official Symbol
    Mup6provided by MGI
    Official Full Name
    major urinary protein 6provided by MGI
    Primary source
    MGI:MGI:3650962
    See related
    Ensembl:ENSMUSG00000078689 AllianceGenome:MGI:3650962
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mup2; Gm12544
    Summary
    Predicted to enable odorant binding activity. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward liver adult (RPKM 73.0) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Mup6 in Genome Data Viewer
    Location:
    4 B3; 4 32.82 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (60003481..60007274)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (60003481..60007274)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 46, member 2 Neighboring gene STARR-positive B cell enhancer ABC_E4632 Neighboring gene STARR-seq mESC enhancer starr_10391 Neighboring gene STARR-seq mESC enhancer starr_10392 Neighboring gene major urinary protein 4 Neighboring gene STARR-seq mESC enhancer starr_10394 Neighboring gene major urinary protein, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_10395 Neighboring gene major urinary protein 7 Neighboring gene major urinary protein 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables odorant binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    major urinary protein (Mup)-like
    Names
    major urinary protein 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081285.2NP_001074754.1  major urinary protein (Mup)-like precursor

      See identical proteins and their annotated locations for NP_001074754.1

      Status: VALIDATED

      Source sequence(s)
      AL929376
      Consensus CDS
      CCDS38773.1
      UniProtKB/TrEMBL
      A2ANT6, A2AV72
      Related
      ENSMUSP00000103141.2, ENSMUST00000107517.8
      Conserved Domains (1) summary
      pfam00061
      Location:33172
      Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      60003481..60007274
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011250081.2XP_011248383.1  major urinary protein (Mup)-like isoform X1

      See identical proteins and their annotated locations for XP_011248383.1

      Conserved Domains (1) summary
      cd19428
      Location:22173
      lipocalin_MUP-like; major urinary proteins (MUPs) and similar proteins